RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CFAP57Q96MR6 1250 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 TBCBQ99426 244 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 MAGEB5Q9BZ81 275 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 THAP2Q9H0W7 228 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 SYNCQ9H7C4 482 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 METTL5Q9NRN9 209 aaKnown RBP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 PIGVQ9NUD9 493 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 XPO7Q9UIA9 1087 aaKnown RBP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 RASAL2Q9UJF2 1139 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 WNT6Q9Y6F9 365 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 CNOT1A5YKK6 2376 aaKnown RBP7.28□□□□□ -1.24
LIMD1-204ENST00000474665 KNL1Q8NG31 2342 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 CHD5Q8TDI0 1954 aa7.28□□□□□ -1.24
LIMD1-204ENST00000474665 TMEM191CA6NGB0 347 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 KCNU1A8MYU2 1149 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 IRAK2O43187 625 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 AKR1B10O60218 316 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 ENDOD1O94919 500 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 RETP07949 1114 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 HMBSP08397 361 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 TPM1P09493 284 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 IRF1P10914 325 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 KRT3P12035 628 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 ABCB4P21439 1286 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 GDI1P31150 447 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 NOS2P35228 1153 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 CXCR3P49682 368 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 HDAC4P56524 1084 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 SNX16P57768 344 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 CSRP2Q16527 193 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 TSR1Q2NL82 804 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 C15orf59Q2T9L4 293 aaPredicted RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 ZC3H12AQ5D1E8 599 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 NAIF1Q69YI7 327 aaPredicted RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 DNAJC24Q6P3W2 148 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 CYP4V2Q6ZWL3 525 aaPredicted RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 HTR3DQ70Z44 454 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 RSRC2Q7L4I2 434 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 PDZD3Q86UT5 571 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 TMTC1Q8IUR5 882 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 ADGRG2Q8IZP9 1017 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 BPIFB1Q8TDL5 484 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 OSCP1Q8WVF1 389 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 NELL1Q92832 810 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 GATA6Q92908 595 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 NXPE3Q969Y0 559 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 ZNF653Q96CK0 615 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 PGAP3Q96FM1 320 aaPredicted RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 CCDC42Q96M95 316 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 MCEEQ96PE7 176 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 CDK5RAP1Q96SZ6 601 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 BAG1Q99933 345 aaPredicted RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 TRMT61BQ9BVS5 477 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 KIF9Q9HAQ2 790 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 ARHGEF3Q9NR81 526 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 SLC2A4RGQ9NR83 387 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 TMPRSS4Q9NRS4 437 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 OLA1Q9NTK5 396 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 ZNHIT6Q9NWK9 470 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 WDR35Q9P2L0 1181 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 CNOT8Q9UFF9 292 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 SALL4Q9UJQ4 1053 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 AGO1Q9UL18 857 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 STRIP2Q9ULQ0 834 aa7.27□□□□□ -1.25
LIMD1-204ENST00000474665 HBS1LQ9Y450 684 aaKnown RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 MTF2Q9Y483 593 aaPredicted RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 EPN1Q9Y6I3 576 aaPredicted RBP7.27□□□□□ -1.25
LIMD1-204ENST00000474665 GOLGA6L7A0A1B0GV03 622 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 E2F8A0AVK6 867 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 ANKRD62A6NC57 917 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 EIF4E1BA6NMX2 242 aaKnown RBP7.26□□□□□ -1.25
LIMD1-204ENST00000474665 EIF3CLB5ME19 914 aaKnown RBP7.26□□□□□ -1.25
LIMD1-204ENST00000474665 M0QYT0 321 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 DPYSL4O14531 572 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 CHADO15335 359 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 NDUFA10O95299 355 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 CYP17A1P05093 508 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 MYBL1P10243 752 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 SRFP11831 508 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 TCF4P15884 667 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 PDGFRAP16234 1089 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 CORO1AP31146 461 aaKnown RBP7.26□□□□□ -1.25
LIMD1-204ENST00000474665 SLC6A4P31645 630 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 PTPN9P43378 593 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 SGSHP51688 502 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 ZNF143P52747 638 aaPredicted RBP7.26□□□□□ -1.25
LIMD1-204ENST00000474665 TBX4P57082 545 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 COG7P83436 770 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 CCZ1BP86790 482 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 CCZ1P86791 482 aaPredicted RBP7.26□□□□□ -1.25
LIMD1-204ENST00000474665 ATP11AP98196 1134 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 MESP2Q0VG99 397 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 NNTQ13423 1086 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 SLC25A52Q3SY17 297 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 FAM133BQ5BKY9 247 aaKnown RBP7.26□□□□□ -1.25
LIMD1-204ENST00000474665 DAB2IPQ5VWQ8 1189 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 LAIR1Q6GTX8 287 aa7.26□□□□□ -1.25
LIMD1-204ENST00000474665 RHBDF2Q6PJF5 856 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms