RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 DNTTP04053 509 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 HLA-FP30511 346 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 PSMC2P35998 433 aaKnown RBP14.61□□□□□ -0.07
CCDC78-209ENST00000474647 MXI1P50539 228 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 RAD23BP54727 409 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 IL9RQ01113 521 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 CAMK2GQ13555 558 aaPredicted RBP14.61□□□□□ -0.07
CCDC78-209ENST00000474647 SOWAHCQ53LP3 525 aaPredicted RBP14.61□□□□□ -0.07
CCDC78-209ENST00000474647 RAB41Q5JT25 222 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 KRT39Q6A163 491 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 FAM217AQ8IXS0 508 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 GALNT15Q8N3T1 639 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 WFIKKN2Q8TEU8 576 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 RNF139Q8WU17 664 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 EDEM1Q92611 657 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 SEMA4DQ92854 862 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 BTBD1Q9H0C5 482 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 PCED1AQ9H1Q7 454 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 TM9SF3Q9HD45 589 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 OLA1Q9NTK5 396 aaKnown RBP14.61□□□□□ -0.07
CCDC78-209ENST00000474647 ANKRD6Q9Y2G4 727 aa14.61□□□□□ -0.07
CCDC78-209ENST00000474647 TULP2O00295 520 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 MSI1O43347 362 aaKnown RBP14.6□□□□□ -0.07
CCDC78-209ENST00000474647 MYL1P05976 194 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 RPL13P26373 211 aaKnown RBP14.6□□□□□ -0.07
CCDC78-209ENST00000474647 GRIA4P48058 902 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 CCT8P50990 548 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 ADIGQ0VDE8 80 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 ADAM9Q13443 819 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 PKP1Q13835 747 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 TTC31Q49AM3 519 aaPredicted RBP14.6□□□□□ -0.07
CCDC78-209ENST00000474647 ATL3Q6DD88 541 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 AHI1Q8N157 1196 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 TTC39CQ8N584 583 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 ANKRD52Q8NB46 1076 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 FBXL13Q8NEE6 735 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 ENGASEQ8NFI3 743 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 BIRC7Q96CA5 298 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 IPO9Q96P70 1041 aaKnown RBP14.6□□□□□ -0.07
CCDC78-209ENST00000474647 TMEM245Q9H330 911 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 LRRC4Q9HBW1 653 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 USP25Q9UHP3 1055 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 GGA2Q9UJY4 613 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 TSPAN16Q9UKR8 245 aa14.6□□□□□ -0.07
CCDC78-209ENST00000474647 FAM47DPA6NHR8 397 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 EIF4E1BA6NMX2 242 aaKnown RBP14.59□□□□□ -0.07
CCDC78-209ENST00000474647 PABPC1P11940 636 aaKnown RBP14.59□□□□□ -0.07
CCDC78-209ENST00000474647 GRK6P43250 576 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 SGSHP51688 502 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 BCAT1P54687 386 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 RPS14P62263 151 aaKnown RBP14.59□□□□□ -0.07
CCDC78-209ENST00000474647 CYP4F3Q08477 520 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 PDE4CQ08493 712 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 TRIP4Q15650 581 aaPredicted RBP14.59□□□□□ -0.07
CCDC78-209ENST00000474647 NFIL3Q16649 462 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 MBLAC2Q68D91 279 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 ARHGAP17Q68EM7 881 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 DBX2Q6ZNG2 339 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 SIX6OS1Q8N1H7 587 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 GANCQ8TET4 914 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 TATDN2Q93075 761 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 IGSF8Q969P0 613 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 TMA16Q96EY4 203 aaKnown RBP14.59□□□□□ -0.07
CCDC78-209ENST00000474647 EEF2KMTQ96G04 330 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 UBXN6Q9BZV1 441 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 RAB20Q9NX57 234 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 HESX1Q9UBX0 185 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 RCOR1Q9UKL0 485 aa14.59□□□□□ -0.07
CCDC78-209ENST00000474647 HBS1LQ9Y450 684 aaKnown RBP14.59□□□□□ -0.07
CCDC78-209ENST00000474647 TRABD2BA6NFA1 517 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 H0Y8X5 98 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 XPO1O14980 1071 aaKnown RBP14.58□□□□□ -0.08
CCDC78-209ENST00000474647 TNFSF14O43557 240 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 RHOBTB3O94955 611 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 CD19P15391 556 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 POLR2EP19388 210 aaKnown RBP14.58□□□□□ -0.08
CCDC78-209ENST00000474647 CD27P26842 260 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 GTF2H1P32780 548 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 SYKP43405 635 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 C21orf59P57076 290 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 ZNF445P59923 1031 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 BST2Q10589 180 aaKnown RBP14.58□□□□□ -0.08
CCDC78-209ENST00000474647 PTPRNQ16849 979 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 INAVAQ3KP66 663 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 SGO2Q562F6 1265 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 DCAF17Q5H9S7 520 aaPredicted RBP14.58□□□□□ -0.08
CCDC78-209ENST00000474647 TCERG1LQ5VWI1 586 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 PM20D1Q6GTS8 502 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 BHLHA9Q7RTU4 235 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 ADIPOR2Q86V24 386 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 WFDC5Q8TCV5 224 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 DCBLD2Q96PD2 775 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 FBRSQ9HAH7 460 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 SCUBE2Q9NQ36 999 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 PRSS16Q9NQE7 514 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 FTSJ1Q9UET6 329 aa14.58□□□□□ -0.08
CCDC78-209ENST00000474647 KNTC1P50748 2209 aa14.57□□□□□ -0.08
CCDC78-209ENST00000474647 YJEFN3A6XGL0 299 aa14.57□□□□□ -0.08
CCDC78-209ENST00000474647 E7ENQ6 273 aa14.57□□□□□ -0.08
CCDC78-209ENST00000474647 TBL1XO60907 577 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms