RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ACTL9Q8TC94 416 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 SLC22A17Q8WUG5 538 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 FAF2Q96CS3 445 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 SLC39A13Q96H72 371 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 FCRL2Q96LA5 508 aaPredicted RBP11.12□□□□□ -0.63
SP140-208ENST00000473711 CSPG4P5Q96PW8 444 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 PNKPQ96T60 521 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 NACA2Q9H009 215 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.12□□□□□ -0.63
SP140-208ENST00000473711 UXTQ9UBK9 157 aaPredicted RBP11.12□□□□□ -0.63
SP140-208ENST00000473711 PCYOX1Q9UHG3 505 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 DNMT3LQ9UJW3 386 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 TLR6Q9Y2C9 796 aa11.12□□□□□ -0.63
SP140-208ENST00000473711 PLXNA3P51805 1871 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 TARSL2A2RTX5 802 aaKnown RBP11.11□□□□□ -0.63
SP140-208ENST00000473711 KCNU1A8MYU2 1149 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 ZNF487B1APH4 448 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 RFXAPO00287 272 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 COCHO43405 550 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 LIASO43766 372 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 RFPL2O75678 378 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 HEXIM1O94992 359 aaKnown RBP11.11□□□□□ -0.63
SP140-208ENST00000473711 SRGAP2BP0DMP2 458 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 SLC2A3P11169 496 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 MYL4P12829 197 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 PECAM1P16284 738 aaPredicted RBP11.11□□□□□ -0.63
SP140-208ENST00000473711 BMP8BP34820 402 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 GGCXP38435 758 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 PPP3CCP48454 512 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 FNTAP49354 379 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 TPI1P60174 286 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 DR1Q01658 176 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 GUCY2DQ02846 1103 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 PABPC1LQ4VXU2 614 aaKnown RBP11.11□□□□□ -0.63
SP140-208ENST00000473711 SLC9A4Q6AI14 798 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 ADGRD2Q7Z7M1 963 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 TMEM150AQ86TG1 271 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 TADA2BQ86TJ2 420 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 VSIG1Q86XK7 387 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 ZNF276Q8N554 614 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 PLD5Q8N7P1 536 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 TTC13Q8NBP0 860 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 ATL2Q8NHH9 583 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 P3H4Q92791 437 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 ZFRQ96KR1 1074 aaKnown RBP11.11□□□□□ -0.63
SP140-208ENST00000473711 CCDC114Q96M63 670 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 RUNDC3BQ96NL0 473 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 HAPLN3Q96S86 360 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 CDK5RAP1Q96SZ6 601 aaKnown RBP11.11□□□□□ -0.63
SP140-208ENST00000473711 TRIM51Q9BSJ1 452 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 RNF38Q9H0F5 515 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 OSBPL2Q9H1P3 480 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 SLC28A3Q9HAS3 691 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 IL21Q9HBE4 155 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 EPB41L5Q9HCM4 733 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 TRPC7Q9HCX4 862 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 MAN1C1Q9NR34 630 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 ETNK2Q9NVF9 386 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 TMEM51Q9NW97 253 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 RCOR3Q9P2K3 495 aaPredicted RBP11.11□□□□□ -0.63
SP140-208ENST00000473711 OR12D3Q9UGF7 316 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 SLC12A6Q9UHW9 1150 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 XPO7Q9UIA9 1087 aaKnown RBP11.11□□□□□ -0.63
SP140-208ENST00000473711 DNPEPQ9ULA0 475 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 MFHAS1Q9Y4C4 1052 aa11.11□□□□□ -0.63
SP140-208ENST00000473711 COL4A4P53420 1690 aaPredicted RBP11.11□□□□□ -0.63
SP140-208ENST00000473711 MYO16Q9Y6X6 1858 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 GREB1Q4ZG55 1949 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 C2orf78A6NCI8 922 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 FAM187AA6NFU0 413 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 ZSCAN5CA6NGD5 496 aaPredicted RBP11.1□□□□□ -0.63
SP140-208ENST00000473711 EPOPA6NHQ4 379 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 APOC4-APOC2K7ER74 178 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 APOEP02649 317 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 APOC2P02655 101 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 ZFXP17010 805 aaPredicted RBP11.1□□□□□ -0.63
SP140-208ENST00000473711 TGM2P21980 687 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 GABRR2P28476 465 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 HCAR3P49019 387 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 KCNQ1P51787 676 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 KPNA1P52294 538 aaPredicted RBP11.1□□□□□ -0.63
SP140-208ENST00000473711 EIF3EP60228 445 aaKnown RBP11.1□□□□□ -0.63
SP140-208ENST00000473711 SEMA3BQ13214 749 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 NNTQ13423 1086 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 BYSLQ13895 437 aaKnown RBP11.1□□□□□ -0.63
SP140-208ENST00000473711 DHX34Q14147 1143 aaKnown RBP11.1□□□□□ -0.63
SP140-208ENST00000473711 TRADDQ15628 312 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 RFX8Q6ZV50 586 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 B4GALNT4Q76KP1 1039 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 C14orf80Q86SX3 495 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 PACS2Q86VP3 889 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 JAMLQ86YT9 394 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 TMC8Q8IU68 726 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 ATP6V0D2Q8N8Y2 350 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 SLC35B2Q8TB61 432 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 GDPD5Q8WTR4 605 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 CYP2S1Q96SQ9 504 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 CORO1BQ9BR76 489 aa11.1□□□□□ -0.63
SP140-208ENST00000473711 LRRC3Q9BY71 257 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms