RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 STAT3P40763 770 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 CBX5P45973 191 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 KPNA1P52294 538 aaPredicted RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 BLVRAP53004 296 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 ACTR3P61158 418 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 MAPRE2Q15555 327 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 TRIM61Q5EBN2 209 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 EPHA10Q5JZY3 1008 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 NOL9Q5SY16 702 aaKnown RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 GPAT2Q6NUI2 795 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 GGT6Q6P531 493 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 CLNKQ7Z7G1 428 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 BRSK2Q8IWQ3 736 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 SCYL3Q8IZE3 742 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 CHCHD4Q8N4Q1 142 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 BTN2A2Q8WVV5 523 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 C10orf82Q8WW14 230 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 RAPGEF4Q8WZA2 1011 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 PTCD3Q96EY7 689 aaKnown RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 NSL1Q96IY1 281 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 FAR2Q96K12 515 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 WDR90Q96KV7 1748 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 C1orf74Q96LT6 269 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 C7orf26Q96N11 449 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 INO80BQ9C086 356 aaPredicted RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 PAIP1Q9H074 479 aaKnown RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 USP44Q9H0E7 712 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 SCPEP1Q9HB40 452 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 VPS45Q9NRW7 570 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 GPRC5DQ9NZD1 345 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 FBXO2Q9UK22 296 aaPredicted RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 DNAJC12Q9UKB3 198 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 ACAD8Q9UKU7 415 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 ERGIC3Q9Y282 383 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 ATP11BQ9Y2G3 1177 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 WDR19Q8NEZ3 1342 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 LAMA4Q16363 1823 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 RGPD5Q99666 1765 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 ILVBLA1L0T0 632 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 DLX3O60479 287 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 PALMO75781 387 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 KCNH1O95259 989 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 TFPTP0C1Z6 253 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 POU3F3P20264 500 aaPredicted RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 PKLRP30613 574 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 CSTF2P33240 577 aaKnown RBP eCLIP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 NUDT1P36639 197 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 GPD2P43304 727 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 CLK3P49761 638 aaKnown RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 GNA13Q14344 377 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 SLC29A2Q14542 456 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 RPS6KA1Q15418 735 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 NAB2Q15742 525 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 STK11Q15831 433 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 TRIM16LQ309B1 348 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 FAM214BQ7L5A3 538 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 LPCAT2Q7L5N7 544 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 ZNF589Q86UQ0 364 aaPredicted RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 NDUFAF2Q8N183 169 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 FIBCD1Q8N539 461 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 ICA1LQ8NDH6 482 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 MGARPQ8TDB4 240 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 AFG1LQ8WV93 481 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 ZNF75CPQ92670 426 aaPredicted RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 TAMM41Q96BW9 452 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 VPS35Q96QK1 796 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 SPOCK3Q9BQ16 436 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 LRRC2Q9BYS8 371 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 NOL6Q9H6R4 1146 aaKnown RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 OLFML3Q9NRN5 406 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 ZDHHC18Q9NUE0 388 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 AGPAT5Q9NUQ2 364 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 C9orf78Q9NZ63 289 aaPredicted RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 STMN3Q9NZ72 180 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 DNM3Q9UQ16 869 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 NOC2LQ9Y3T9 749 aaKnown RBP5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 CACNA1FO60840 1977 aa5.3□□□□□ -1.56
TMEM39A-206ENST00000473684 H3BSA7 217 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 LEFTY1O75610 366 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 S100A6P06703 90 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ZNF23P17027 643 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 BTF3P20290 206 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 MUTP22033 750 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 CXCR2P25025 360 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PRDX6P30041 224 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 PGM1P36871 562 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 MAP3K7CLP57077 242 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 IFITM2Q01629 132 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 TRAP1Q12931 704 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 DLG1Q12959 904 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 RALGDSQ12967 914 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 GRB10Q13322 594 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 IFIT5Q13325 482 aaKnown RBP5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 ATP1A4Q13733 1029 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 NFE2L1Q14494 772 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 NPTX1Q15818 432 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 MOGQ16653 247 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 AGAP7PQ5VUJ5 663 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 FAM91A1Q658Y4 838 aa5.29□□□□□ -1.56
TMEM39A-206ENST00000473684 GTF2IRD2BQ6EKJ0 949 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms