RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 BEND5Q7L4P6 421 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 EMC1Q8N766 993 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 C3orf20Q8ND61 904 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 JOSD2Q8TAC2 188 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 ZNF653Q96CK0 615 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 SERPINB11Q96P15 392 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 SELENOOQ9BVL4 669 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 FAM204AQ9H8W3 233 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 THG1LQ9NWX6 298 aaKnown RBP9.47□□□□□ -0.89
SMC4-214ENST00000472991 DUS2Q9NX74 493 aaKnown RBP9.47□□□□□ -0.89
SMC4-214ENST00000472991 WDR35Q9P2L0 1181 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 LSM7Q9UK45 103 aaKnown RBP9.47□□□□□ -0.89
SMC4-214ENST00000472991 HBS1LQ9Y450 684 aaKnown RBP9.47□□□□□ -0.89
SMC4-214ENST00000472991 PCDHB11Q9Y5F2 797 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 CUL9Q8IWT3 2517 aa9.47□□□□□ -0.89
SMC4-214ENST00000472991 SYNJ2BP-COX16A0A087WUM0 186 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 E2F8A0AVK6 867 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 ARNTLO00327 626 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 AKR1B10O60218 316 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 GREM1O60565 184 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 TRUB2O95900 331 aaKnown RBP9.46□□□□□ -0.9
SMC4-214ENST00000472991 ARSAP15289 507 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 ABCB4P21439 1286 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 RRM1P23921 792 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 NOS2P35228 1153 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 MATKP42679 507 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 GSK3AP49840 483 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 SULT1E1P49888 294 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 TBX4P57082 545 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 ZXDAP98168 799 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 CDK17Q00537 523 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 GFPT1Q06210 699 aaPredicted RBP9.46□□□□□ -0.9
SMC4-214ENST00000472991 TNK2Q07912 1038 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 CLN3Q13286 438 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 TRIP4Q15650 581 aaPredicted RBP9.46□□□□□ -0.9
SMC4-214ENST00000472991 SLC18A3Q16572 532 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 ASTE1Q2TB18 679 aaPredicted RBP9.46□□□□□ -0.9
SMC4-214ENST00000472991 CCDC122Q5T0U0 273 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 OTUD1Q5VV17 481 aaPredicted RBP9.46□□□□□ -0.9
SMC4-214ENST00000472991 DNAJC24Q6P3W2 148 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 ALKBH5Q6P6C2 394 aaKnown RBP9.46□□□□□ -0.9
SMC4-214ENST00000472991 CYP2U1Q7Z449 544 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 BBS7Q8IWZ6 715 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 UBALD2Q8IYN6 164 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 OSCP1Q8WVF1 389 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 DNASE1L2Q92874 299 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 PLD4Q96BZ4 506 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 VCPIP1Q96JH7 1222 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 FAM83CQ9BQN1 747 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 ISCUQ9H1K1 167 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 EBF3Q9H4W6 596 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 NHEJ1Q9H9Q4 299 aaPredicted RBP9.46□□□□□ -0.9
SMC4-214ENST00000472991 HPS4Q9NQG7 708 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 SLC2A4RGQ9NR83 387 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 SPTLC3Q9NUV7 552 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.46□□□□□ -0.93e-18■■■■■ 78.4
SMC4-214ENST00000472991 COX16Q9P0S2 106 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 IMPACTQ9P2X3 320 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 TMEM59LQ9UK28 342 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 STAP1Q9ULZ2 295 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 NENFQ9UMX5 172 aa9.46□□□□□ -0.9
SMC4-214ENST00000472991 NYNRINQ9P2P1 1898 aaKnown RBP9.46□□□□□ -0.9
SMC4-214ENST00000472991 TCRBV5S1A1TA0A578 114 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 M0QYT0 321 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 SLC9A3R1O14745 358 aaPredicted RBP9.45□□□□□ -0.9
SMC4-214ENST00000472991 IGLV3-25P01717 112 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 IGLV3-27P01718 113 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 KLKB1P03952 638 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 KRT3P12035 628 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 TFE3P19532 575 aaPredicted RBP9.45□□□□□ -0.9
SMC4-214ENST00000472991 CORO1AP31146 461 aaKnown RBP9.45□□□□□ -0.9
SMC4-214ENST00000472991 PFKPQ01813 784 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 NME3Q13232 169 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 PDGFRLQ15198 375 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 EML3Q32P44 896 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 HTR3DQ70Z44 454 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 DENND1CQ8IV53 801 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 TTC8Q8TAM2 541 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 CSGALNACT1Q8TDX6 532 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 ATP2A3Q93084 1043 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 TRIM11Q96F44 468 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 FCRL2Q96LA5 508 aaPredicted RBP9.45□□□□□ -0.9
SMC4-214ENST00000472991 CCDC42Q96M95 316 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 CFAP57Q96MR6 1250 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 MCEEQ96PE7 176 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 PANX2Q96RD6 677 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 TBCBQ99426 244 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 NPY6RQ99463 290 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 DDX23Q9BUQ8 820 aaKnown RBP9.45□□□□□ -0.9
SMC4-214ENST00000472991 DCLK3Q9C098 648 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 LINC00597Q9H2U6 94 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 HEBP1Q9NRV9 189 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 DDIT4Q9NX09 232 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 GTSE1Q9NYZ3 720 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 TBC1D14Q9P2M4 693 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 MYO1AQ9UBC5 1043 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 CNOT8Q9UFF9 292 aaKnown RBP9.45□□□□□ -0.9
SMC4-214ENST00000472991 FBXL21Q9UKT6 434 aa9.45□□□□□ -0.9
SMC4-214ENST00000472991 CA14Q9ULX7 337 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms