RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 LDOC1O95751 146 aaPredicted RBP16.28■□□□□ 0.2
CCDC142-205ENST00000472962 ATP5BP06576 529 aaKnown RBP16.28■□□□□ 0.2
CCDC142-205ENST00000472962 VAMP7P51809 220 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 RPS14P62263 151 aaKnown RBP16.28■□□□□ 0.2
CCDC142-205ENST00000472962 EHHADHQ08426 723 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 INCA1Q0VD86 236 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 FOXD4L5Q5VV16 416 aaPredicted RBP16.28■□□□□ 0.2
CCDC142-205ENST00000472962 SHC4Q6S5L8 630 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 FMNL3Q8IVF7 1028 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 TMC2Q8TDI7 906 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 FOXD4L4Q8WXT5 416 aaPredicted RBP16.28■□□□□ 0.2
CCDC142-205ENST00000472962 BAP1Q92560 729 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 TMA16Q96EY4 203 aaKnown RBP16.28■□□□□ 0.2
CCDC142-205ENST00000472962 CNDP2Q96KP4 475 aaKnown RBP16.28■□□□□ 0.2
CCDC142-205ENST00000472962 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 FBRSQ9HAH7 460 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 OSGEPQ9NPF4 335 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 AASDHPPTQ9NRN7 309 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 USP3Q9Y6I4 520 aa16.28■□□□□ 0.2
CCDC142-205ENST00000472962 CAPN9O14815 690 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 CALUO43852 315 aaPredicted RBP16.27■□□□□ 0.2
CCDC142-205ENST00000472962 RNASEH1O60930 286 aaKnown RBP16.27■□□□□ 0.2
CCDC142-205ENST00000472962 KRT13P13646 458 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 POLR2EP19388 210 aaKnown RBP16.27■□□□□ 0.2
CCDC142-205ENST00000472962 HLA-FP30511 346 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 CTSKP43235 329 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 ME1P48163 572 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 GCLMP48507 274 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 TKTL1P51854 596 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 CLDN6P56747 220 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 ST8SIA6P61647 398 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 ZBTB16Q05516 673 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 DNAJC3Q13217 504 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 KMT5BQ4FZB7 885 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 KCNT1Q5JUK3 1230 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 MBLAC2Q68D91 279 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 ZNF776Q68DI1 518 aaPredicted RBP16.27■□□□□ 0.2
CCDC142-205ENST00000472962 ZNF605Q86T29 641 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 GRAMD1CQ8IYS0 662 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 AHI1Q8N157 1196 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 GOLGA1Q92805 767 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 FCRL3Q96P31 734 aaPredicted RBP16.27■□□□□ 0.2
CCDC142-205ENST00000472962 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 PRSS16Q9NQE7 514 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 SUN2Q9UH99 717 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 GGA2Q9UJY4 613 aa16.27■□□□□ 0.2
CCDC142-205ENST00000472962 CBX4O00257 560 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 RFPL3O75679 317 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 TRIM49P0CI25 452 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 TRIM49CP0CI26 452 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 PABPC1P11940 636 aaKnown RBP16.26■□□□□ 0.19
CCDC142-205ENST00000472962 PDIA4P13667 645 aaKnown RBP16.26■□□□□ 0.19
CCDC142-205ENST00000472962 HOXD9P28356 352 aaPredicted RBP16.26■□□□□ 0.19
CCDC142-205ENST00000472962 RACK1P63244 317 aaKnown RBP16.26■□□□□ 0.19
CCDC142-205ENST00000472962 SFSWAPQ12872 951 aaKnown RBP16.26■□□□□ 0.19
CCDC142-205ENST00000472962 STK4Q13043 487 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 KIAA0895LQ68EN5 471 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 PIGZQ86VD9 579 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 SLC9A9Q8IVB4 645 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 EID2Q8N6I1 236 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 SLC6A18Q96N87 628 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 IPO9Q96P70 1041 aaKnown RBP16.26■□□□□ 0.19
CCDC142-205ENST00000472962 TMEM245Q9H330 911 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 OLA1Q9NTK5 396 aaKnown RBP16.26■□□□□ 0.19
CCDC142-205ENST00000472962 DMAC2Q9NW81 257 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 FBXL12Q9NXK8 326 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 SFMBT1Q9UHJ3 866 aa16.26■□□□□ 0.19
CCDC142-205ENST00000472962 COL5A1P20908 1838 aaPredicted RBP16.25■□□□□ 0.19
CCDC142-205ENST00000472962 A0A1B0GTQ1 180 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 TK2O00142 265 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 PDXKO00764 312 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 YEATS4O95619 227 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 ZBED1O96006 694 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 DLDP09622 509 aaKnown RBP16.25■□□□□ 0.19
CCDC142-205ENST00000472962 EIF2S3P41091 472 aaKnown RBP16.25■□□□□ 0.19
CCDC142-205ENST00000472962 ZNF445P59923 1031 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 TARDBPQ13148 414 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC142-205ENST00000472962 HES3Q5TGS1 186 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 RBBP8NLQ8NC74 664 aaPredicted RBP16.25■□□□□ 0.19
CCDC142-205ENST00000472962 TAS1R2Q8TE23 839 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 NDRG1Q92597 394 aaKnown RBP16.25■□□□□ 0.19
CCDC142-205ENST00000472962 EDEM1Q92611 657 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 ELF4Q99607 663 aaPredicted RBP16.25■□□□□ 0.19
CCDC142-205ENST00000472962 OMDQ99983 421 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 ULBP1Q9BZM6 244 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 APOBEC3GQ9HC16 384 aaKnown RBP16.25■□□□□ 0.19
CCDC142-205ENST00000472962 STIM2Q9P246 746 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 PCDHGA1Q9Y5H4 931 aa16.25■□□□□ 0.19
CCDC142-205ENST00000472962 HELZ2Q9BYK8 2649 aaKnown RBP16.25■□□□□ 0.19
CCDC142-205ENST00000472962 LRRC72A6NJI9 287 aa16.24■□□□□ 0.19
CCDC142-205ENST00000472962 VILLO15195 856 aa16.24■□□□□ 0.19
CCDC142-205ENST00000472962 ATXN7O15265 892 aaPredicted RBP16.24■□□□□ 0.19
CCDC142-205ENST00000472962 TBL1XO60907 577 aa16.24■□□□□ 0.19
CCDC142-205ENST00000472962 CDK4P11802 303 aa16.24■□□□□ 0.19
CCDC142-205ENST00000472962 ADGRF1Q5T601 910 aa16.24■□□□□ 0.19
CCDC142-205ENST00000472962 INTS8Q75QN2 995 aaKnown RBP16.24■□□□□ 0.19
CCDC142-205ENST00000472962 CCDC117Q8IWD4 279 aaPredicted RBP16.24■□□□□ 0.19
CCDC142-205ENST00000472962 KIAA0895Q8NCT3 520 aa16.24■□□□□ 0.19
CCDC142-205ENST00000472962 TMEM176AQ96HP8 235 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms