RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 FCGRTP55899 365 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 GJA9P57773 515 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 GPX6P59796 221 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 YWHAZP63104 245 aaKnown RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 CCDC15Q0P6D6 951 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 NAB1Q13506 487 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 FASTKD3Q14CZ7 662 aaKnown RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 SETDB1Q15047 1291 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 PDK1Q15118 436 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 PKN2Q16513 984 aaKnown RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 ARL13BQ3SXY8 428 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 TTC39BQ5VTQ0 682 aaPredicted RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 ANKRD22Q5VYY1 191 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 TRNP1Q6NT89 227 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 RGMBQ6NW40 437 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 NPNTQ6UXI9 565 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 DSTYKQ6XUX3 929 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 CAPN12Q6ZSI9 719 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 RPAINQ86UA6 219 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 FAM228AQ86W67 206 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 SLC26A11Q86WA9 606 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 PQLC3Q8N755 202 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 SMG8Q8ND04 991 aaKnown RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 GDAP1Q8TB36 358 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 ZNF398Q8TD17 642 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 DENND1AQ8TEH3 1009 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 TFB1MQ8WVM0 346 aaKnown RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 ACDQ96AP0 544 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 FAM149B1Q96BN6 582 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 PGBD4Q96DM1 585 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 UROC1Q96N76 676 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 PPP1R10Q96QC0 940 aaKnown RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 PAIP2Q9BPZ3 127 aaKnown RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 NAT9Q9BTE0 207 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 IQCGQ9H095 443 aaKnown RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 DPEP3Q9H4B8 488 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 RRAGCQ9HB90 399 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 USP29Q9HBJ7 922 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 POPDC2Q9HBU9 364 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 CNGB3Q9NQW8 809 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 EIF2B3Q9NR50 452 aaKnown RBP7.89□□□□□ -1.15
CCDC171-205ENST00000472806 FAM105AQ9NUU6 356 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 FGFR1OP2Q9NVK5 253 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 FLRT1Q9NZU1 646 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 KLK14Q9P0G3 267 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 DSEQ9UL01 958 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 CDH9Q9ULB4 789 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 FZD10Q9ULW2 581 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 CHMP2BQ9UQN3 213 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 CDY2AQ9Y6F7 541 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 TEX264Q9Y6I9 313 aa7.89□□□□□ -1.15
CCDC171-205ENST00000472806 C9IYK1 514 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 KBTBD13C9JR72 458 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 AP3B1O00203 1094 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 IGF2BP3O00425 579 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC171-205ENST00000472806 GABRDO14764 452 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 CAPN9O14815 690 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 GPR37L1O60883 481 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 OPHN1O60890 802 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 FAM155BO75949 473 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 KRT38O76015 456 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 THBS1P07996 1170 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 C6orf222P0C671 652 aaPredicted RBP7.88□□□□□ -1.15
CCDC171-205ENST00000472806 TROVE2P10155 538 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC171-205ENST00000472806 RARBP10826 455 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 ODC1P11926 461 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 KRT4P19013 534 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 TAC1P20366 129 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 IL4RP24394 825 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 SSTR1P30872 391 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 SKIV2L2P42285 1042 aaKnown RBP7.88□□□□□ -1.15
CCDC171-205ENST00000472806 NKX3-2P78367 333 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 BEX3Q00994 111 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 DEUP1Q05D60 604 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 ADIGQ0VDE8 80 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 PTK7Q13308 1070 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 SEMA5AQ13591 1074 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 MAPRE1Q15691 268 aaKnown RBP7.88□□□□□ -1.15
CCDC171-205ENST00000472806 GNASQ5JWF2 1037 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 SPDYAQ5MJ70 313 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 SH3PXD2AQ5TCZ1 1133 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 CYS1Q717R9 158 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 CCDC91Q7Z6B0 441 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 PIGZQ86VD9 579 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 DEFB106AQ8N104 65 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 CCDC63Q8NA47 563 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 DCAKDQ8WVC6 231 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 TMEM40Q8WWA1 233 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 SLC44A1Q8WWI5 657 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 HTR3CQ8WXA8 447 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 IRGQQ8WZA9 623 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 CDKL2Q92772 493 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 WNT8BQ93098 351 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 NTAN1Q96AB6 310 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 PIWIL1Q96J94 861 aaKnown RBP7.88□□□□□ -1.15
CCDC171-205ENST00000472806 SENP8Q96LD8 212 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 CSPG4P5Q96PW8 444 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 SLC2A13Q96QE2 648 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 SYT15Q9BQS2 421 aa7.88□□□□□ -1.15
CCDC171-205ENST00000472806 TUBB6Q9BUF5 446 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms