RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 PAFAH1B1P43034 410 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 KCNQ1P51787 676 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 ZXDBP98169 803 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 RARS2Q5T160 578 aaKnown RBP20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 STXBP5Q5T5C0 1151 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 GPR158Q5T848 1215 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 PIK3R6Q5UE93 754 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 DDX42Q86XP3 938 aaKnown RBP eCLIP20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 ZDHHC14Q8IZN3 488 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 PYROXD2Q8N2H3 581 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 CEP112Q8N8E3 955 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 MAB21L3Q8N8X9 362 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 CYP2S1Q96SQ9 504 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 EPAS1Q99814 870 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 RETREG1Q9H6L5 497 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 PIDD1Q9HB75 910 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 TRPC7Q9HCX4 862 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 CWC15Q9P013 229 aaKnown RBP20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 OR12D3Q9UGF7 316 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 MRPS23Q9Y3D9 190 aaKnown RBP20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 CPQQ9Y646 472 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 HS3ST4Q9Y661 456 aa20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 HELZP42694 1942 aaKnown RBP20.11■□□□□ 0.81
CHMP2B-204ENST00000472024 FAM72CH0Y354 149 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 TJP3O95049 919 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 KLKB1P03952 638 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 GJA1P17302 382 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 CEBPBP17676 345 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 HARS2P49590 506 aaKnown RBP20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 TFDP2Q14188 446 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 CYP1B1Q16678 543 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 ODF2Q5BJF6 829 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 ANKRD20A8PQ5CZ79 823 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 MS4A13Q5J8X5 152 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 CCDC181Q5TID7 509 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 FAM72AQ5TYM5 149 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 FAM72DQ6L9T8 149 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 POTEHQ6S545 545 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 HTR3DQ70Z44 454 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 FAM72BQ86X60 149 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 CCDC50Q8IVM0 306 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 PQLC3Q8N755 202 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 MNS1Q8NEH6 495 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 PCDH19Q8TAB3 1148 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 CAPZA3Q96KX2 299 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 GAS2L1Q99501 681 aaPredicted RBP20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 MAGEB5Q9BZ81 275 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 PPARGC1AQ9UBK2 798 aaKnown RBP20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 XPO7Q9UIA9 1087 aaKnown RBP20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 ZNF510Q9Y2H8 683 aa20.1■□□□□ 0.81
CHMP2B-204ENST00000472024 DRGXA6NNA5 263 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 WASH4PA8MWX3 477 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 ACSL4O60488 711 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 LRIG2O94898 1065 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 CKMP06732 381 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 ARL4AP40617 200 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 ADCY2Q08462 1091 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 LONRF2Q1L5Z9 754 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 FAM133BQ5BKY9 247 aaKnown RBP20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 NADSYN1Q6IA69 706 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 RFX8Q6ZV50 586 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 C12orf50Q8NA57 414 aaPredicted RBP20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 ITFG1Q8TB96 612 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 CALN1Q9BXU9 219 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 FRMD8P1Q9BZ68 369 aaPredicted RBP20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 TRPV4Q9HBA0 871 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 ARHGEF4Q9NR80 690 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 GKN1Q9NS71 199 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 GDE1Q9NZC3 331 aa20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 NUP210Q8TEM1 1887 aaPredicted RBP20.09■□□□□ 0.81
CHMP2B-204ENST00000472024 DENND4AQ7Z401 1863 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 TCRBV7S2A1N4TA0A589 114 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 CCDC188H7C350 402 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 EEF2KO00418 725 aaKnown RBP20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 DCLK1O15075 740 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 KRT10P13645 584 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 ZFXP17010 805 aaPredicted RBP20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 GOT1P17174 413 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 FSHRP23945 695 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 CORO1AP31146 461 aaKnown RBP20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 SLC11A2P49281 568 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 DLX2Q07687 328 aaPredicted RBP20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 USP4Q13107 963 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 MMRN1Q13201 1228 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 PPP6R3Q5H9R7 873 aaPredicted RBP20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 ZFYVE27Q5T4F4 411 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 NPAS3Q8IXF0 933 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 SPATA4Q8NEY3 305 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 WBP2Q969T9 261 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 KIF9Q9HAQ2 790 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 SMARCAL1Q9NZC9 954 aa20.08■□□□□ 0.81
CHMP2B-204ENST00000472024 E2F8A0AVK6 867 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 APOC4-APOC2K7ER74 178 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 FGF10O15520 208 aaPredicted RBP20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 APOC2P02655 101 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 HMBSP08397 361 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 TGM2P21980 687 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 AVPR1AP37288 418 aa20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 AUHQ13825 339 aaKnown RBP20.07■□□□□ 0.8
CHMP2B-204ENST00000472024 PAFAH1B3Q15102 231 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms