RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SYTL5Q8TDW5 730 aaPredicted RBP13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 AP4E1Q9UPM8 1137 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SHOC2Q9UQ13 582 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GPSM3Q9Y4H4 160 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PTGES3LE9PB15 166 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PABPC1P11940 636 aaKnown RBP13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TKTL1P51854 596 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PLEKHA7Q6IQ23 1121 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GLT6D1Q7Z4J2 308 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 C6orf62Q9GZU0 229 aaPredicted RBP13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 THAP2Q9H0W7 228 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 HEY2Q9UBP5 337 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CHKBQ9Y259 395 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SUPT20HL2P0C7V6 817 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PSMB9P28065 219 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ACAP2Q15057 778 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DDR2Q16832 855 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF227Q86WZ6 799 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ELMO1Q92556 727 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KCTD14Q9BQ13 255 aaPredicted RBP13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZDHHC6Q9H6R6 413 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 LRRC4BQ9NT99 713 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MYH3P11055 1940 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PLEKHG2Q9H7P9 1386 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SGPL1O95470 568 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 S100A1P23297 94 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CBX5P45973 191 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MAP1SQ66K74 1059 aaPredicted RBP13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF280DQ6N043 979 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KLHL23Q8NBE8 558 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SPG21Q9NZD8 308 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SERPINH1P50454 418 aaKnown RBP13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SOX10P56693 466 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 LRRC6Q86X45 466 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SLC20A1Q8WUM9 679 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TRIM2Q9C040 744 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 VPS51Q9UID3 782 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SPATA31A3Q5VYP0 1347 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 A0A087WZ62 844 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 OR10H2O60403 315 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 LYNP07948 512 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MYBPC2Q14324 1141 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TKFCQ3LXA3 575 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CES3Q6UWW8 571 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RASSF6Q6ZTQ3 369 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RASGEF1AQ8N9B8 481 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FDXACB1Q9BRP7 624 aaPredicted RBP13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 AASDHPPTQ9NRN7 309 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MAPK1P28482 360 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DPF2Q92785 391 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FANCEQ9HB96 536 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CYLDQ9NQC7 956 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ARHGEF12Q9NZN5 1544 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 HOXA2O43364 376 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CYP2A7P20853 494 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FDFT1P37268 417 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 BCAT1P54687 386 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TRIQKQ629K1 86 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 OVOS1Q6IE37 1185 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF671Q8TAW3 534 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 AHSPQ9NZD4 102 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TUBGCP4Q9UGJ1 667 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ADAM30Q9UKF2 790 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 VANGL2Q9ULK5 521 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 HS6ST1O60243 411 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ATG7O95352 703 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TYMPP19971 482 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RSBN1Q5VWQ0 802 aaPredicted RBP13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DAB2IPQ5VWQ8 1189 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GPR141Q7Z602 305 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KIRREL3Q8IZU9 778 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TDRD5Q8NAT2 981 aaKnown RBP13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GTF3C2Q8WUA4 911 aaPredicted RBP13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FAM151AQ8WW52 585 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DUSP12Q9UNI6 340 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 POLR2EP19388 210 aaKnown RBP13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GPR15P49685 360 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SERPINB8P50452 374 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 NAB2Q15742 525 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FAM124AQ86V42 546 aa13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 METTL16Q86W50 562 aaKnown RBP13.53□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PTGISQ16647 500 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ACAD10Q6JQN1 1059 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FAM171BQ6P995 826 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CASP12Q6UXS9 341 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CATSPER2Q96P56 530 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DPY30Q9C005 99 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 HAO1Q9UJM8 370 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DNALI1O14645 258 aaPredicted RBP13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 INPP4BO15327 924 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SEC22BO75396 215 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TCEA3O75764 348 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PPP1R37O75864 691 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CLCA4Q14CN2 919 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 EIF2S3LQ2VIR3 472 aaKnown RBP13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 C1QTNF7Q9BXJ2 289 aa13.52□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PRRG3Q9BZD7 231 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms