RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SLC27A6Q9Y2P4 619 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 MYH10P35580 1976 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 ATMQ13315 3056 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 MGAQ8IWI9 3026 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 A0A1W2PPC4 97 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 TLR4O00206 839 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 YKT6O15498 198 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 SLC26A4O43511 780 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 TIMM44O43615 452 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 SIGLEC6O43699 453 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 CSO75390 466 aaKnown RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 IGHV4-34P06331 123 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 ATP5BP06576 529 aaKnown RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 P4HA1P13674 534 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 POLR2EP19388 210 aaKnown RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 GJB2P29033 226 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 RBMS1P29558 406 aaKnown RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 CASP4P49662 377 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 GALCP54803 685 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 EHHADHQ08426 723 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 SFSWAPQ12872 951 aaKnown RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 CAMK2GQ13555 558 aaPredicted RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 ALCAMQ13740 583 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 SHBQ15464 509 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 PKDCCQ504Y2 493 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 SGO2Q562F6 1265 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 MBLAC2Q68D91 279 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 Q6ZNB5 142 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 MMAAQ8IVH4 418 aaKnown RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 PDILTQ8N807 584 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 GOLGA1Q92805 767 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 ZNF578Q96N58 590 aaPredicted RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 CLIC6Q96NY7 704 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 DEPDC7Q96QD5 511 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 STRA6Q9BX79 667 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 DCLK3Q9C098 648 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 NEUROG2Q9H2A3 272 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 PABPC3Q9H361 631 aaKnown RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 KIAA1586Q9HCI6 787 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 CYLDQ9NQC7 956 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 THSD1Q9NS62 852 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 MARCH2Q9P0N8 246 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 STIM2Q9P246 746 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 STK17AQ9UEE5 414 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 SERGEFQ9UGK8 458 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 HMGXB4Q9UGU5 601 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 GGA2Q9UJY4 613 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 FBXO10Q9UK96 956 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 SCML2Q9UQR0 700 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 PAXBP1Q9Y5B6 917 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 PTPRQQ9UMZ3 2332 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 PLXNA2O75051 1894 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 CABIN1Q9Y6J0 2220 aa7.19□□□□□ -1.26
HDAC1-204ENST00000471488 TP53BP1Q12888 1972 aaPredicted RBP7.19□□□□□ -1.26
HDAC1-204ENST00000471488 KNL1Q8NG31 2342 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 AGRPO00253 132 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 KIAA0391O15091 583 aaKnown RBP7.18□□□□□ -1.26
HDAC1-204ENST00000471488 SIN3BO75182 1162 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 PABPC1P11940 636 aaKnown RBP7.18□□□□□ -1.26
HDAC1-204ENST00000471488 CD58P19256 250 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 HLA-FP30511 346 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 E2F1Q01094 437 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 ZBTB16Q05516 673 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 SRSF1Q07955 248 aaKnown RBP eCLIP7.18□□□□□ -1.266e-6■□□□□ 11
HDAC1-204ENST00000471488 CYP24A1Q07973 514 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 ILKQ13418 452 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 NCOA4Q13772 614 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 ENPP2Q13822 863 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 CST6Q15828 149 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 MPPE1Q53F39 396 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 CRTC1Q6UUV9 634 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 CLEC20AQ6ZU45 233 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 LSMEM2Q8N112 164 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 DCBLD1Q8N8Z6 715 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 ZNF516Q92618 1163 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 TTC9Q92623 222 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 DNAJC19Q96DA6 116 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 WBP1Q96G27 269 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 DUSP9Q99956 384 aaKnown RBP7.18□□□□□ -1.26
HDAC1-204ENST00000471488 SDCBP2Q9H190 292 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 TMEM245Q9H330 911 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 EBF2Q9HAK2 575 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 OLFML3Q9NRN5 406 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 IL37Q9NZH6 218 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 SUN2Q9UH99 717 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 SATB2Q9UPW6 733 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 CA5BQ9Y2D0 317 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 PCDHA5Q9Y5H7 936 aa7.18□□□□□ -1.26
HDAC1-204ENST00000471488 PIEZO2Q9H5I5 2752 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 FAM92AA1XBS5 289 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 VPS37CA5D8V6 355 aaPredicted RBP7.17□□□□□ -1.26
HDAC1-204ENST00000471488 TRIM38O00635 465 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 STX6O43752 255 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 OPA1O60313 960 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 EXOC3O60645 756 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 TBL1XO60907 577 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 BMP15O95972 392 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 IL1BP01584 269 aa7.17□□□□□ -1.26
HDAC1-204ENST00000471488 DLDP09622 509 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms