RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 UNC45BQ8IWX7 931 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 TCEAL8Q8IYN2 117 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 TSEN2Q8NCE0 465 aaKnown RBP9.7□□□□□ -0.86
VPS52-216ENST00000471309 GIPC2Q8TF65 315 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 SLC39A13Q96H72 371 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 FCRL2Q96LA5 508 aaPredicted RBP9.7□□□□□ -0.86
VPS52-216ENST00000471309 MYRFLQ96LU7 910 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 FOXP3Q9BZS1 431 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 CYP4F11Q9HBI6 524 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 DTLQ9NZJ0 730 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 OR12D3Q9UGF7 316 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 SFMBT1Q9UHJ3 866 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 ANAPC5Q9UJX4 755 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 TPX2Q9ULW0 747 aaKnown RBP9.7□□□□□ -0.86
VPS52-216ENST00000471309 SHOC2Q9UQ13 582 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 NEU3Q9UQ49 428 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 LZTS1Q9Y250 596 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 RWDD3Q9Y3V2 267 aa9.7□□□□□ -0.86
VPS52-216ENST00000471309 H7C0C1 242 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 SMAPO00193 183 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 NCAM2O15394 837 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 TEX28O15482 410 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 FGF10O15520 208 aaPredicted RBP9.69□□□□□ -0.86
VPS52-216ENST00000471309 TLL1O43897 1013 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 LRIG2O94898 1065 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 IFNB1P01574 187 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 APOEP02649 317 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 ZSCAN5DPP0CG00 497 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 HMGA1P17096 107 aaKnown RBP9.69□□□□□ -0.86
VPS52-216ENST00000471309 SYN1P17600 705 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 ERCC2P18074 760 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 SERPINB6P35237 376 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 ALDH1A3P47895 512 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 ATP5OP48047 213 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 PPP3CCP48454 512 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 TUBP50607 506 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 KPNA1P52294 538 aaPredicted RBP9.69□□□□□ -0.86
VPS52-216ENST00000471309 TBX4P57082 545 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 RING1Q06587 406 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 DHX9Q08211 1270 aaKnown RBP9.69□□□□□ -0.86
VPS52-216ENST00000471309 EFEMP1Q12805 493 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 SLC10A2Q12908 348 aaPredicted RBP9.69□□□□□ -0.86
VPS52-216ENST00000471309 PLD1Q13393 1074 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 SLMAPQ14BN4 828 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 VEPH1Q14D04 833 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 MORF4L2Q15014 288 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 PRKD1Q15139 912 aaPredicted RBP9.69□□□□□ -0.86
VPS52-216ENST00000471309 ACBD5Q5T8D3 534 aaPredicted RBP9.69□□□□□ -0.86
VPS52-216ENST00000471309 MANEALQ5VSG8 457 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 KLHDC10Q6PID8 442 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 C4orf22Q6V702 233 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 PCGF5Q86SE9 256 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 PRUNE1Q86TP1 453 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 HOOK3Q86VS8 718 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 FAM71DQ8N9W8 422 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 KLHL23Q8NBE8 558 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 AUTS2Q8WXX7 1259 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 C1orf74Q96LT6 269 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 LBHD1Q9BQE6 289 aaPredicted RBP9.69□□□□□ -0.86
VPS52-216ENST00000471309 ADAM7Q9H2U9 754 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 USP29Q9HBJ7 922 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 ETNK2Q9NVF9 386 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 OGFRQ9NZT2 677 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 MARCH2Q9P0N8 246 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 PAK5Q9P286 719 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 NUDT5Q9UKK9 219 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 HBS1LQ9Y450 684 aaKnown RBP9.69□□□□□ -0.86
VPS52-216ENST00000471309 INSL5Q9Y5Q6 135 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 IRAK3Q9Y616 596 aa9.69□□□□□ -0.86
VPS52-216ENST00000471309 OBSL1O75147 1896 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 CLUHO75153 1309 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 LCHNA4D1U4 455 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 GOLGA6BA6NDN3 693 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 PRRG1O14668 218 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 PPP1R12AO14974 1030 aaPredicted RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 KCNN4O15554 427 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 TLR5O60602 858 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 ADH1AP07327 375 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 CNPP09543 421 aaKnown RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 ETS1P14921 441 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 RBL1P28749 1068 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 EPHB2P29323 1055 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 ELF1P32519 619 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 CTNNB1P35222 781 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 RPL22P35268 128 aaKnown RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 BMPR1AP36894 532 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 HSD17B3P37058 310 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 EPHB3P54753 998 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 UBE3AQ05086 875 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 TWF1Q12792 350 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 PDK1Q15118 436 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 UAP1Q16222 522 aaPredicted RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 C10orf120Q5SQS8 335 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 CFAP58Q5T655 872 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 RNASEH2BQ5TBB1 312 aaKnown RBP9.68□□□□□ -0.86
VPS52-216ENST00000471309 LRIG3Q6UXM1 1119 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 ITIH5Q86UX2 942 aa9.68□□□□□ -0.86
VPS52-216ENST00000471309 RELL1Q8IUW5 271 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms