RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 ZNF530Q6P9A1 599 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 RAB11FIP2Q7L804 512 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 LRRTM4Q86VH4 590 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 TMPRSS6Q8IU80 811 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 FTSJ3Q8IY81 847 aaKnown RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 ABRAQ8N0Z2 381 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 CNTROBQ8N137 903 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 CLASRPQ8N2M8 674 aaKnown RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 TMEM171Q8WVE6 324 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 OSCP1Q8WVF1 389 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 MPP4Q96JB8 637 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 HIST1H2AAQ96QV6 131 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 ADOQ96SZ5 270 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 ALOXE3Q9BYJ1 711 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 INO80BQ9C086 356 aaPredicted RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 POLKQ9UBT6 870 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 SERTAD3Q9UJW9 196 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 ABT1Q9ULW3 272 aaKnown RBP6.39□□□□□ -1.39
CKS1B-204ENST00000471245 NFU1Q9UMS0 254 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 ZBTB1Q9Y2K1 713 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 TCAF1Q9Y4C2 921 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 SNX14Q9Y5W7 946 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 ZNF541Q9H0D2 1346 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 MRC1P22897 1456 aa6.39□□□□□ -1.39
CKS1B-204ENST00000471245 TRGV11A0A075B6L2 103 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 HMX3A6NHT5 357 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 J3KTA2 159 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 NCR1O76036 304 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 CDKL5O76039 1030 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 BMPR1AP36894 532 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 GATMP50440 423 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 FAM189BP81408 668 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 ANKRD45Q5TZF3 282 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 NFRKBQ6P4R8 1299 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 RINLQ6ZS11 566 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 TTC30AQ86WT1 665 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 HERC6Q8IVU3 1022 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 SCAMP5Q8TAC9 235 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 WDR60Q8WVS4 1066 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 ATG4AQ8WYN0 398 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 CAPNS2Q96L46 248 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 VN1R3Q9BXE9 311 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 AMBRA1Q9C0C7 1298 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 TWSG1Q9GZX9 223 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 UNKLQ9H9P5 680 aaKnown RBP6.38□□□□□ -1.39
CKS1B-204ENST00000471245 SEPSECSQ9HD40 501 aaKnown RBP6.38□□□□□ -1.39
CKS1B-204ENST00000471245 TRIM36Q9NQ86 728 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 SMPD4Q9NXE4 827 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 HACL1Q9UJ83 578 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 FEM1BQ9UK73 627 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 RIMKLBQ9ULI2 386 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 TESMINQ9Y4I5 508 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 RNF123Q5XPI4 1314 aa6.38□□□□□ -1.39
CKS1B-204ENST00000471245 AKAP11Q9UKA4 1901 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 SIPA1L3O60292 1781 aaPredicted RBP6.37□□□□□ -1.39
CKS1B-204ENST00000471245 B9A039 149 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 ZSCAN9O15535 394 aaPredicted RBP6.37□□□□□ -1.39
CKS1B-204ENST00000471245 CBFA2T3O75081 653 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 TK1P04183 234 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 PYGLP06737 847 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 GATA3P23771 443 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 ADORA2AP29274 412 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 HTR7P34969 479 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 CDK7P50613 346 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 PRKD1Q15139 912 aaPredicted RBP6.37□□□□□ -1.39
CKS1B-204ENST00000471245 FAM110CQ1W6H9 321 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 C1orf141Q5JVX7 400 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 TTC22Q5TAA0 569 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 TBC1D9BQ66K14 1250 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 PRR5LQ6MZQ0 368 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 RINT1Q6NUQ1 792 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 IZUMO1Q8IYV9 350 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 CHST13Q8NET6 341 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 OR6Y1Q8NGX8 325 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 SUN3Q8TAQ9 357 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 HERVK_113Q902F9 699 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 LOXL4Q96JB6 756 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 SENP7Q9BQF6 1050 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 EIF2AK1Q9BQI3 630 aaKnown RBP6.37□□□□□ -1.39
CKS1B-204ENST00000471245 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 ZNF768Q9H5H4 540 aaKnown RBP6.37□□□□□ -1.39
CKS1B-204ENST00000471245 EPS8L2Q9H6S3 715 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 RASSF1Q9NS23 344 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 C19orf53Q9UNZ5 99 aaPredicted RBP6.37□□□□□ -1.39
CKS1B-204ENST00000471245 USP22Q9UPT9 525 aa6.37□□□□□ -1.39
CKS1B-204ENST00000471245 PNMA6EA0A0J9YXQ4 647 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 H0Y3Z8 333 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 AGPSO00116 658 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 EYA2O00167 538 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 CKMT1AP12532 417 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 DDX6P26196 483 aaKnown RBP eCLIP6.36□□□□□ -1.39
CKS1B-204ENST00000471245 KLRK1P26718 216 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 NTSR1P30989 418 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 MCM2P49736 904 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 ATXN1P54253 815 aaKnown RBP6.36□□□□□ -1.39
CKS1B-204ENST00000471245 PRKAA2P54646 552 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 TIRAPP58753 221 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 ACTR2P61160 394 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 ADAM17P78536 824 aa6.36□□□□□ -1.39
CKS1B-204ENST00000471245 RESTQ13127 1097 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms