RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TPGS1Q6ZTW0 290 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 CLEC20AQ6ZU45 233 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 GPRIN1Q7Z2K8 1008 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 RGL4Q8IZJ4 473 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 CHCHD4Q8N4Q1 142 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 C12orf29Q8N999 325 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 SPC24Q8NBT2 197 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 LMO3Q8TAP4 145 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 TAS1R2Q8TE23 839 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 ADAMTS14Q8WXS8 1223 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 DNASE2BQ8WZ79 361 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 ELMO3Q96BJ8 720 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 FAXDC2Q96IV6 333 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 FAM81BQ96LP2 452 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 NT5C1BQ96P26 610 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 HNRNPABQ99729 332 aaKnown RBP9.5□□□□□ -0.89
SF3A1-206ENST00000471037 ZDHHC5Q9C0B5 715 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 TTYH3Q9C0H2 523 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 CD93Q9NPY3 652 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 FAM207AQ9NSI2 230 aaPredicted RBP9.5□□□□□ -0.89
SF3A1-206ENST00000471037 FAM49BQ9NUQ9 324 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.5□□□□□ -0.89
SF3A1-206ENST00000471037 CACNA2D2Q9NY47 1150 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 USP36Q9P275 1121 aaKnown RBP9.5□□□□□ -0.89
SF3A1-206ENST00000471037 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 SLC27A6Q9Y2P4 619 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 RAD54BQ9Y620 910 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 ADAMTS9Q9P2N4 1935 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 GON4LQ3T8J9 2241 aa9.5□□□□□ -0.89
SF3A1-206ENST00000471037 A0A1W2PQH9 124 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 TAF4O00268 1085 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 SH3BP5O60239 455 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 PENKP01210 267 aaPredicted RBP9.49□□□□□ -0.89
SF3A1-206ENST00000471037 GYPCP04921 128 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 FTH1P19P0C7X4 201 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 UCHL3P15374 230 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 SLC9A1P19634 815 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 ACO1P21399 889 aaKnown RBP9.49□□□□□ -0.89
SF3A1-206ENST00000471037 CD6P30203 668 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 KLK7P49862 253 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 GRIK2Q13002 908 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 ORC1Q13415 861 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 STARD3Q14849 445 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 ACAP1Q15027 740 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 KLHDC7AQ5VTJ3 777 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 SMYD5Q6GMV2 418 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 DPY19L2P1Q6NXN4 242 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 CCDC186Q7Z3E2 898 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 GLRX5Q86SX6 157 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 NAXDQ8IW45 347 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 ZNF397Q8NF99 534 aaPredicted RBP9.49□□□□□ -0.89
SF3A1-206ENST00000471037 CADM4Q8NFZ8 388 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 SEMA4DQ92854 862 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 P2RY11Q96G91 374 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 TWNKQ96RR1 684 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 SLC6A17Q9H1V8 727 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 GANQ9H2C0 597 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 NMUR1Q9HB89 426 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 SIX2Q9NPC8 291 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 WSB2Q9NYS7 404 aaPredicted RBP9.49□□□□□ -0.89
SF3A1-206ENST00000471037 CLIC5Q9NZA1 410 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 THAP10Q9P2Z0 257 aaPredicted RBP9.49□□□□□ -0.89
SF3A1-206ENST00000471037 APEX2Q9UBZ4 518 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 DNMT3LQ9UJW3 386 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 CAPN11Q9UMQ6 739 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 ZNF510Q9Y2H8 683 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 STON1Q9Y6Q2 735 aa9.49□□□□□ -0.89
SF3A1-206ENST00000471037 A0A1B0GTW7 788 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 WASH3PC4AMC7 463 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 AKR1B15C9JRZ8 316 aaPredicted RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 MDM4O15151 490 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 CBFA2T3O75081 653 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 STC2O76061 302 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 IGLV3-19P01714 112 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 PTMAP06454 111 aaKnown RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 ZNF883P0CG24 379 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 RARGP13631 454 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 TBXAS1P24557 533 aaPredicted RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 ADORA2BP29275 332 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 CHKAP35790 457 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 KIF11P52732 1056 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 MFAP3P55082 362 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 POLR2FP61218 127 aaKnown RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 ZBED6P86452 979 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 GCNT1Q02742 428 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 FUT11Q495W5 492 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 C10orf120Q5SQS8 335 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 FYB2Q5VWT5 728 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 SPOPLQ6IQ16 392 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 KIAA1324Q6UXG2 1013 aaKnown RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 ENOSF1Q7L5Y1 443 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 TADA2BQ86TJ2 420 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 CNGA4Q8IV77 575 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 FMNL3Q8IVF7 1028 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 JAKMIP2Q96AA8 810 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 CYFIP2Q96F07 1278 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 TOE1Q96GM8 510 aaKnown RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 CAMK1GQ96NX5 476 aa9.48□□□□□ -0.89
SF3A1-206ENST00000471037 CDK5RAP1Q96SZ6 601 aaKnown RBP9.48□□□□□ -0.89
SF3A1-206ENST00000471037 NT5C1AQ9BXI3 368 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms