RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 SCARA5Q6ZMJ2 495 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 C20orf204Q6ZNR8 217 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 YTHDF3Q7Z739 585 aaKnown RBP5.9□□□□□ -1.46
HDAC8-216ENST00000470998 TAX1BP1Q86VP1 789 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 XYLT1Q86Y38 959 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 TDRPQ86YL5 185 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 PASD1Q8IV76 773 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 ALLCQ8N6M5 410 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 TOP6BLQ8N6T0 577 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 CEP120Q8N960 986 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 SLC4A11Q8NBS3 891 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 CMASQ8NFW8 434 aaPredicted RBP5.9□□□□□ -1.46
HDAC8-216ENST00000470998 TRAPPC12Q8WVT3 735 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 POF1BQ8WVV4 589 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 RIN2Q8WYP3 895 aaPredicted RBP5.9□□□□□ -1.46
HDAC8-216ENST00000470998 PMEPA1Q969W9 287 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 HSFY1Q96LI6 401 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 CFAP57Q96MR6 1250 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 CDCA3Q99618 268 aaPredicted RBP5.9□□□□□ -1.46
HDAC8-216ENST00000470998 NSRP1Q9H0G5 558 aaKnown RBP5.9□□□□□ -1.46
HDAC8-216ENST00000470998 EPN3Q9H201 632 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 NEUROG2Q9H2A3 272 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 CCDC134Q9H6E4 229 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 UBN1Q9NPG3 1134 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 CHST12Q9NRB3 414 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 TMEM161AQ9NX61 479 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 GDAP2Q9NXN4 497 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 RCOR3Q9P2K3 495 aaPredicted RBP5.9□□□□□ -1.46
HDAC8-216ENST00000470998 KANSL3Q9P2N6 904 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 SLC12A6Q9UHW9 1150 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 ST3GAL5Q9UNP4 418 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 AGAP1Q9UPQ3 857 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 SNX24Q9Y343 169 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 NEU2Q9Y3R4 380 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 NR2E1Q9Y466 385 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 PCDHB12Q9Y5F1 795 aa5.9□□□□□ -1.46
HDAC8-216ENST00000470998 MICAL3Q7RTP6 2002 aa5.9□□□□□ -1.47
HDAC8-216ENST00000470998 A0A087WUV0 522 aaPredicted RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 LRRD1A4D1F6 860 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 ERICH4A6NGS2 130 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 A6NHS1 94 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 NDUFAB1O14561 156 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 RASGRF2O14827 1237 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 MCF2LO15068 1137 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 MDM4O15151 490 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 GRM6O15303 877 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 PRPSAP2O60256 369 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 GPR32O75388 356 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 LRCH4O75427 683 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 TTC4O95801 387 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 EOMESO95936 686 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 FAM107AO95990 144 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 NID1P14543 1247 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 IL9P15248 144 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 LAG3P18627 525 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 GPD1P21695 349 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 TGM2P21980 687 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 KLRC2P26717 231 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 COL8A1P27658 744 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 LRPAP1P30533 357 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 SDC4P31431 198 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 LSP1P33241 339 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 PHBP35232 272 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 PPM1AP35813 382 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 ADCY8P40145 1251 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 SSR1P43307 286 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 PTPN9P43378 593 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 MMP13P45452 471 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 RPL34P49207 117 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 RAB27AP51159 221 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 AFF1P51825 1210 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 NDST1P52848 882 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 SLC18A1P54219 525 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 TAS2R40P59535 323 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 RPL7AP62424 266 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 MRPS25P82663 173 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 PLCB3Q01970 1234 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 SLC25A11Q02978 314 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 TMEM62Q0P6H9 643 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 BST2Q10589 180 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 SMAD4Q13485 552 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 DSC3Q14574 896 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 SEZ6Q53EL9 994 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 TNFAIP8L3Q5GJ75 292 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 TMEM31Q5JXX7 168 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 HIBCHQ6NVY1 386 aaPredicted RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 DENND1BQ6P3S1 775 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 CENPUQ71F23 418 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 BZW1Q7L1Q6 419 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 GSTA5Q7RTV2 222 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 ADAT2Q7Z6V5 191 aaKnown RBP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 TMEM110Q86TL2 294 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 FAM228AQ86W67 206 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 DDX42Q86XP3 938 aaKnown RBP eCLIP5.89□□□□□ -1.47
HDAC8-216ENST00000470998 ZDHHC14Q8IZN3 488 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 CRYBG2Q8N1P7 616 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 WDTC1Q8N5D0 677 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 SLC35B2Q8TB61 432 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 SPPL3Q8TCT6 385 aa5.89□□□□□ -1.47
HDAC8-216ENST00000470998 BCAS4Q8TDM0 211 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms