RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 DAAM1Q9Y4D1 1078 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 RAD54BQ9Y620 910 aa16.3■□□□□ 0.2
HDAC6-218ENST00000470942 LRRC10BA6NIK2 292 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 EPHB6O15197 1021 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 MMEP08473 750 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 ATP1A3P13637 1013 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 CDH5P33151 784 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-218ENST00000470942 SOX5P35711 763 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 STAT1P42224 750 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 RNASE9P60153 205 aaKnown RBP16.29■□□□□ 0.2
HDAC6-218ENST00000470942 E2F5Q15329 346 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 OLFML1Q6UWY5 402 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 C11orf74Q86VG3 221 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 ATP6V0D2Q8N8Y2 350 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 HJURPQ8NCD3 748 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-218ENST00000470942 MSANTD4Q8NCY6 345 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 RLN3Q8WXF3 142 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 C18orf8Q96DM3 657 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 LOXL4Q96JB6 756 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 ZC3H10Q96K80 434 aaKnown RBP16.29■□□□□ 0.2
HDAC6-218ENST00000470942 GABRG3Q99928 467 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 BPIFA3Q9BQP9 254 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 IRX2Q9BZI1 471 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-218ENST00000470942 NUCKS1Q9H1E3 243 aaKnown RBP16.29■□□□□ 0.2
HDAC6-218ENST00000470942 HSD3B7Q9H2F3 369 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 ARRDC1-AS1Q9H2J1 176 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.29■□□□□ 0.2
HDAC6-218ENST00000470942 DDIT4Q9NX09 232 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 THAP10Q9P2Z0 257 aaPredicted RBP16.29■□□□□ 0.2
HDAC6-218ENST00000470942 STON1Q9Y6Q2 735 aa16.29■□□□□ 0.2
HDAC6-218ENST00000470942 A0A1W2PQF6 199 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 MAP3K13O43283 966 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 TIMM44O43615 452 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 LRP3O75074 770 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 DAB1O75553 588 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 EPN2O95208 641 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 IGLV3-25P01717 112 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 GABRG2P18507 467 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 HLA-FP30511 346 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 JAM2P57087 298 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 BYSLQ13895 437 aaKnown RBP16.28■□□□□ 0.2
HDAC6-218ENST00000470942 STARD3Q14849 445 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 EIF4HQ15056 248 aaKnown RBP16.28■□□□□ 0.2
HDAC6-218ENST00000470942 MPP7Q5T2T1 576 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 KIAA1211LQ6NV74 962 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 CHST9Q7L1S5 443 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 SLC26A9Q7LBE3 791 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 CHSY1Q86X52 802 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 ZNF677Q86XU0 584 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 ZDHHC17Q8IUH5 632 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 CCDC117Q8IWD4 279 aaPredicted RBP16.28■□□□□ 0.2
HDAC6-218ENST00000470942 DHX40Q8IX18 779 aaKnown RBP16.28■□□□□ 0.2
HDAC6-218ENST00000470942 CARNMT1Q8N4J0 409 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 OLIG1Q8TAK6 271 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 EPS8L1Q8TE68 723 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 WFIKKN2Q8TEU8 576 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 SLC20A1Q8WUM9 679 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 CPA5Q8WXQ8 436 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 SORCS1Q8WY21 1168 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 SPACA7Q96KW9 195 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 SEMA4GQ9NTN9 838 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 ABCB8Q9NUT2 735 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 XPO7Q9UIA9 1087 aaKnown RBP16.28■□□□□ 0.2
HDAC6-218ENST00000470942 GGA2Q9UJY4 613 aa16.28■□□□□ 0.2
HDAC6-218ENST00000470942 CEP192Q8TEP8 1941 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 NPC1O15118 1278 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 LSM8O95777 96 aaKnown RBP16.27■□□□□ 0.2
HDAC6-218ENST00000470942 SLC2A3P11169 496 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 PABPC1P11940 636 aaKnown RBP16.27■□□□□ 0.2
HDAC6-218ENST00000470942 ABCB4P21439 1286 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 TACR2P21452 398 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 BCKDHBP21953 392 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 TGM1P22735 817 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 NOS2P35228 1153 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 P2RY2P41231 377 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 IL12RB1P42701 662 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 GABRB2P47870 512 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 ZNF165P49910 485 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 RPS24P62847 133 aaKnown RBP16.27■□□□□ 0.2
HDAC6-218ENST00000470942 NME3Q13232 169 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 ZNF234Q14588 700 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 CCDC6Q16204 474 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 C2CD6Q53TS8 623 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 MS4A13Q5J8X5 152 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 FAM102AQ5T9C2 384 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-218ENST00000470942 NAA35Q5VZE5 725 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 RAP1GAP2Q684P5 730 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 TMEM215Q68D42 235 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 APTXQ7Z2E3 356 aaKnown RBP16.27■□□□□ 0.2
HDAC6-218ENST00000470942 MFN1Q8IWA4 741 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 LGI2Q8N0V4 545 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 CFAP52Q8N1V2 620 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 ZNF397Q8NF99 534 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-218ENST00000470942 WFDC5Q8TCV5 224 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 BTN2A3PQ96KV6 586 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 PRICKLE1Q96MT3 831 aaPredicted RBP16.27■□□□□ 0.2
HDAC6-218ENST00000470942 ERGIC2Q96RQ1 377 aa16.27■□□□□ 0.2
HDAC6-218ENST00000470942 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.27■□□□□ 0.2
HDAC6-218ENST00000470942 NOCTQ9UK39 431 aaKnown RBP16.27■□□□□ 0.2
HDAC6-218ENST00000470942 PLXND1Q9Y4D7 1925 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms