RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 GLE1Q53GS7 698 aaKnown RBP10.09□□□□□ -0.79
CCM2-204ENST00000470837 RABGAP1LQ5R372 815 aa10.09□□□□□ -0.79
CCM2-204ENST00000470837 CYP4V2Q6ZWL3 525 aaPredicted RBP10.09□□□□□ -0.79
CCM2-204ENST00000470837 GAREM2Q75VX8 874 aa10.09□□□□□ -0.79
CCM2-204ENST00000470837 GSTA5Q7RTV2 222 aa10.09□□□□□ -0.79
CCM2-204ENST00000470837 TMEM150AQ86TG1 271 aa10.09□□□□□ -0.79
CCM2-204ENST00000470837 CCDC117Q8IWD4 279 aaPredicted RBP10.09□□□□□ -0.79
CCM2-204ENST00000470837 PYROXD2Q8N2H3 581 aa10.09□□□□□ -0.79
CCM2-204ENST00000470837 C12orf76Q8N812 135 aaPredicted RBP10.09□□□□□ -0.79
CCM2-204ENST00000470837 KRT12Q99456 494 aa10.09□□□□□ -0.79
CCM2-204ENST00000470837 LRRC3Q9BY71 257 aa10.09□□□□□ -0.79
CCM2-204ENST00000470837 RBM12Q9NTZ6 932 aaKnown RBP10.09□□□□□ -0.79
CCM2-204ENST00000470837 HCFC1R1Q9NWW0 138 aa10.09□□□□□ -0.79
CCM2-204ENST00000470837 CWC15Q9P013 229 aaKnown RBP10.09□□□□□ -0.79
CCM2-204ENST00000470837 CPQQ9Y646 472 aa10.09□□□□□ -0.79
CCM2-204ENST00000470837 PLXNA4Q9HCM2 1894 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 E9PAM4 449 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 H7C0C1 242 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 ACSL4O60488 711 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 STC2O76061 302 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 LRIG2O94898 1065 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 ECEL1O95672 775 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 IGLV3-27P01718 113 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 GJA1P17302 382 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 FSHRP23945 695 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 MCM3P25205 808 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 ACTN2P35609 894 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 ATP5OP48047 213 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 KCNQ1P51787 676 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 MLLT6P55198 1093 aaPredicted RBP10.08□□□□□ -0.8
CCM2-204ENST00000470837 SLC7A9P82251 487 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 NRG1Q02297 640 aaPredicted RBP10.08□□□□□ -0.8
CCM2-204ENST00000470837 CCNG2Q16589 344 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 TAZQ16635 292 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 MS4A13Q5J8X5 152 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 ATAT1Q5SQI0 421 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 PRPF38BQ5VTL8 546 aaKnown RBP10.08□□□□□ -0.8
CCM2-204ENST00000470837 ANKRD54Q6NXT1 300 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 C1orf228Q6PIY5 440 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 CCDC137Q6PK04 289 aaKnown RBP10.08□□□□□ -0.8
CCM2-204ENST00000470837 TMEM184AQ6ZMB5 413 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 DENND1CQ8IV53 801 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 CMTM8Q8IZV2 173 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 MICALL1Q8N3F8 863 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 MMGT1Q8N4V1 131 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 MYRIPQ8NFW9 859 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 VN1R2Q8NFZ6 395 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 SHKBP1Q8TBC3 707 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 FAM71BQ8TC56 605 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 C1orf54Q8WWF1 131 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 AZIN2Q96A70 460 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 FAF2Q96CS3 445 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 RIPOR3Q96MK2 946 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 RPRD1AQ96P16 312 aaPredicted RBP10.08□□□□□ -0.8
CCM2-204ENST00000470837 CYP2S1Q96SQ9 504 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 KLF16Q9BXK1 252 aaPredicted RBP10.08□□□□□ -0.8
CCM2-204ENST00000470837 RNF38Q9H0F5 515 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 GKN1Q9NS71 199 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 MTMR10Q9NXD2 777 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 ZNF148Q9UQR1 794 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 HEY1Q9Y5J3 304 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 RAD54BQ9Y620 910 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 HS3ST4Q9Y661 456 aa10.08□□□□□ -0.8
CCM2-204ENST00000470837 PTPRDP23468 1912 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 PPP1R12AO14974 1030 aaPredicted RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 NCAM2O15394 837 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 STK10O94804 968 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 OLFM2O95897 454 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 TUBBP07437 444 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 ERCC2P18074 760 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 MX2P20592 715 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 TACR2P21452 398 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 AMPD1P23109 780 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 IL4RP24394 825 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 GTF2F1P35269 517 aaKnown RBP eCLIP10.07□□□□□ -0.8
CCM2-204ENST00000470837 CHKAP35790 457 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 EIF3EP60228 445 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 NTHL1P78549 312 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 DR1Q01658 176 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 OTUD4Q01804 1114 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 KLF1Q13351 362 aaPredicted RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 SNX1Q13596 522 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 AUHQ13825 339 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 BYSLQ13895 437 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 DHX34Q14147 1143 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 PDK1Q15118 436 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 PPP1R7Q15435 360 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 ADGRF1Q5T601 910 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 TTC39BQ5VTQ0 682 aaPredicted RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 RAP1GAP2Q684P5 730 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 SLC9A4Q6AI14 798 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 DARS2Q6PI48 645 aaKnown RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 GPR149Q86SP6 731 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 LGI2Q8N0V4 545 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 LZTR1Q8N653 840 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 PLD5Q8N7P1 536 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 PRELID2Q8N945 189 aa10.07□□□□□ -0.8
CCM2-204ENST00000470837 C12orf50Q8NA57 414 aaPredicted RBP10.07□□□□□ -0.8
CCM2-204ENST00000470837 ATL2Q8NHH9 583 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms