RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 MARCH2Q9P0N8 246 aa9.22□□□□□ -0.93
LMCD1-207ENST00000470776 STIM2Q9P246 746 aa9.22□□□□□ -0.93
LMCD1-207ENST00000470776 AMACRQ9UHK6 382 aa9.22□□□□□ -0.93
LMCD1-207ENST00000470776 FEZ2Q9UHY8 353 aaPredicted RBP9.22□□□□□ -0.93
LMCD1-207ENST00000470776 DMGDHQ9UI17 866 aaKnown RBP9.22□□□□□ -0.93
LMCD1-207ENST00000470776 HPCAL4Q9UM19 191 aa9.22□□□□□ -0.93
LMCD1-207ENST00000470776 MAGED2Q9UNF1 606 aaPredicted RBP9.22□□□□□ -0.93
LMCD1-207ENST00000470776 NEU2Q9Y3R4 380 aa9.22□□□□□ -0.93
LMCD1-207ENST00000470776 TTC28Q96AY4 2481 aa9.21□□□□□ -0.93
LMCD1-207ENST00000470776 SYNJ2BP-COX16A0A087WUM0 186 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 A0A1W2PPC1 479 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 GOLGA6BA6NDN3 693 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 SOBPA7XYQ1 873 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 SOX1O00570 391 aaPredicted RBP9.21□□□□□ -0.94
LMCD1-207ENST00000470776 DCLK1O15075 740 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 LRG1P02750 347 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 ITGAVP06756 1048 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 HNRNPA1P09651 372 aaKnown RBP eCLIP9.21□□□□□ -0.94
LMCD1-207ENST00000470776 ARL4AP40617 200 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 NR2C2P49116 596 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 LMAN1P49257 510 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 TBX4P57082 545 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 LMNB2Q03252 620 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 EFEMP1Q12805 493 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 XRCC4Q13426 336 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 KCNC3Q14003 757 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 NOMO1Q15155 1222 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 LLGL1Q15334 1064 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 KAZNQ674X7 775 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 C8orf74Q6P047 294 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 CCDC137Q6PK04 289 aaKnown RBP9.21□□□□□ -0.94
LMCD1-207ENST00000470776 RFX6Q8HWS3 928 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 ZNF683Q8IZ20 524 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 TDHQ8IZJ6 230 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 ACTL9Q8TC94 416 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 MICAL1Q8TDZ2 1067 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 AENQ8WTP8 325 aaKnown RBP9.21□□□□□ -0.94
LMCD1-207ENST00000470776 C1orf54Q8WWF1 131 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 ZNF512Q96ME7 567 aaPredicted RBP9.21□□□□□ -0.94
LMCD1-207ENST00000470776 CCSER2Q9H7U1 834 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 ZNF334Q9HCZ1 680 aaPredicted RBP9.21□□□□□ -0.94
LMCD1-207ENST00000470776 TMPRSS4Q9NRS4 437 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 COX16Q9P0S2 106 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 DPP7Q9UHL4 492 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 DNMT3LQ9UJW3 386 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 NUDT5Q9UKK9 219 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 RAD54BQ9Y620 910 aa9.21□□□□□ -0.94
LMCD1-207ENST00000470776 PLXNA4Q9HCM2 1894 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 IGLV3-10A0A075B6K4 115 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 SLC12A8A0AV02 714 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 WASH4PA8MWX3 477 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 FAM72CH0Y354 149 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 H3BQF6 201 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 APOL1O14791 398 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 TTI1O43156 1089 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 MSI1O43347 362 aaKnown RBP9.2□□□□□ -0.94
LMCD1-207ENST00000470776 COCHO43405 550 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 RNF40O75150 1001 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 PAGE1O75459 146 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 LRIG2O94898 1065 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 FGF19O95750 216 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 TBX18O95935 607 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 SPATA31D3P0C874 917 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 GOT1P17174 413 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 AMPD1P23109 780 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 KCNJ1P48048 391 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 VCPP55072 806 aaKnown RBP9.2□□□□□ -0.94
LMCD1-207ENST00000470776 COG7P83436 770 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 SMAD3P84022 425 aaKnown RBP9.2□□□□□ -0.94
LMCD1-207ENST00000470776 DR1Q01658 176 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 OTUD4Q01804 1114 aaKnown RBP9.2□□□□□ -0.94
LMCD1-207ENST00000470776 TAF12Q16514 161 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 DUSP6Q16828 381 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 C5orf22Q49AR2 442 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 PPP6R3Q5H9R7 873 aaPredicted RBP9.2□□□□□ -0.94
LMCD1-207ENST00000470776 PPM1LQ5SGD2 360 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 C10orf120Q5SQS8 335 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 FAM72AQ5TYM5 149 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 NUGGCQ68CJ6 796 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 DUPD1Q68J44 220 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 NCBP2-AS2Q69YL0 99 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 FAM72DQ6L9T8 149 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 SPATA31D4Q6ZUB0 917 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 RFX8Q6ZV50 586 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 FAM72BQ86X60 149 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 JAMLQ86YT9 394 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 UNC45BQ8IWX7 931 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 MREGQ8N565 214 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 ATP6V0D2Q8N8Y2 350 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 LEMD2Q8NC56 503 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 FAM76AQ8TAV0 307 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.2□□□□□ -0.94
LMCD1-207ENST00000470776 GRK7Q8WTQ7 553 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 ATG4AQ8WYN0 398 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 RNF34Q969K3 372 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 PLD4Q96BZ4 506 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 BTN2A3PQ96KV6 586 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 EPAS1Q99814 870 aa9.2□□□□□ -0.94
LMCD1-207ENST00000470776 PRMT1Q99873 361 aaKnown RBP9.2□□□□□ -0.94
LMCD1-207ENST00000470776 ERP44Q9BS26 406 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms