RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 TMC7Q7Z402 723 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 PLD6Q8N2A8 252 aaKnown RBP10.59□□□□□ -0.71
SMC4-210ENST00000469762 DEPDC1BQ8WUY9 529 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 ANKRD36BP1Q96IX9 119 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 TEX13BQ9BXU2 312 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 B3GNT5Q9BYG0 378 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 MAN1C1Q9NR34 630 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 TSPAN16Q9UKR8 245 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 SPDYE16A6NNV3 312 aaPredicted RBP10.59□□□□□ -0.71
SMC4-210ENST00000469762 ARIH2O95376 493 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 USP4Q13107 963 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 KRT81Q14533 505 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 PDK3Q15120 406 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 C6orf163Q5TEZ5 329 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 PDPK2PQ6A1A2 396 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 OR6B2Q6IFH4 312 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 SCYL2Q6P3W7 929 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 TTC30AQ86WT1 665 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 WDR75Q8IWA0 830 aaKnown RBP10.59□□□□□ -0.71
SMC4-210ENST00000469762 FLAD1Q8NFF5 587 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 C12orf42Q96LP6 360 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 RNPEPQ9H4A4 650 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 STN1Q9H668 368 aaKnown RBP10.59□□□□□ -0.71
SMC4-210ENST00000469762 E2F8A0AVK6 867 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 CAPN8A6NHC0 703 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 ACKR2O00590 384 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 CYP2F1P24903 491 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 NUMBP49757 651 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 SERPINB9P50453 376 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 NDST1P52848 882 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 SURF1Q15526 300 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 DBN1Q16643 649 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 SLC9B1Q4ZJI4 515 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 IER5Q5VY09 327 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 LCLAT1Q6UWP7 414 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 CATSPERGQ6ZRH7 1159 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 DPH6Q7L8W6 267 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 ARHGAP22Q7Z5H3 698 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 FBXW8Q8N3Y1 598 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.59□□□□□ -0.71
SMC4-210ENST00000469762 HEXIM2Q96MH2 286 aaKnown RBP10.59□□□□□ -0.71
SMC4-210ENST00000469762 SIKE1Q9BRV8 207 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 VRTNQ9H8Y1 702 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 COPG2Q9UBF2 871 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 GTF2IRD1Q9UHL9 959 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 USP3Q9Y6I4 520 aa10.59□□□□□ -0.71
SMC4-210ENST00000469762 KLHL2O95198 593 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 SERPINE1P05121 402 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 VDRP11473 427 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 MBTD1Q05BQ5 628 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 INCA1Q0VD86 236 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 MED21Q13503 144 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 LY6KQ17RY6 165 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 KCNT2Q6UVM3 1135 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 SCUBE3Q8IX30 993 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 ARHGAP18Q8N392 663 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 C7orf31Q8N865 590 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 CLEC4CQ8WTT0 213 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 PRICKLE1Q96MT3 831 aaPredicted RBP10.58□□□□□ -0.71
SMC4-210ENST00000469762 LPIN3Q9BQK8 851 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 ZNF670Q9BS34 389 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 PDGFDQ9GZP0 370 aaPredicted RBP10.58□□□□□ -0.71
SMC4-210ENST00000469762 RBM38Q9H0Z9 239 aaKnown RBP10.58□□□□□ -0.71
SMC4-210ENST00000469762 NGRNQ9NPE2 291 aaKnown RBP10.58□□□□□ -0.71
SMC4-210ENST00000469762 DTLQ9NZJ0 730 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 APOBEC2Q9Y235 224 aaKnown RBP10.58□□□□□ -0.71
SMC4-210ENST00000469762 COMMD3-BMI1R4GMX3 469 aa10.58□□□□□ -0.71
SMC4-210ENST00000469762 SOWAHBA6NEL2 793 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 MDM4O15151 490 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 PAPSS1O43252 624 aaPredicted RBP10.58□□□□□ -0.72
SMC4-210ENST00000469762 DCXO43602 365 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 PGM3O95394 542 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 FOLH1Q04609 750 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 OLIG2Q13516 323 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 ITGA7Q13683 1181 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 HSDL1Q3SXM5 330 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 BOLA3Q53S33 107 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 PRAMEF18Q5VWM3 479 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 TICAM1Q8IUC6 712 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 B4GALNT2Q8NHY0 566 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 NRBP2Q9NSY0 501 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 ZNF112Q9UJU3 913 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 INPP5FQ9Y2H2 1132 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 DNAJA2O60884 412 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 APBA3O96018 575 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 ITGA2BP08514 1039 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 EDNRBP24530 442 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 ANKRD20A4Q4UJ75 823 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 PPP6R3Q5H9R7 873 aaPredicted RBP10.58□□□□□ -0.72
SMC4-210ENST00000469762 PPP1R26Q5T8A7 1209 aaPredicted RBP10.58□□□□□ -0.72
SMC4-210ENST00000469762 ARMC3Q5W041 872 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 NCBP2-AS2Q69YL0 99 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 PAOXQ6QHF9 649 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 ZNF781Q8N8C0 355 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 ACMSDQ8TDX5 336 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 QKIQ96PU8 341 aaKnown RBP eCLIP10.58□□□□□ -0.727e-7■■■■■ 232.7
SMC4-210ENST00000469762 GCNAQ96QF7 691 aa10.58□□□□□ -0.72
SMC4-210ENST00000469762 EPB41L1Q9H4G0 881 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms