RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 HLA-DRAP01903 254 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 ENO1P06733 434 aaKnown RBP9.9□□□□□ -0.83
HDAC3-205ENST00000469550 INHBAP08476 426 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 PYGBP11216 843 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 UQCRBP14927 111 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 TBXAS1P24557 533 aaPredicted RBP9.9□□□□□ -0.83
HDAC3-205ENST00000469550 PLA2G5P39877 138 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 CCNFP41002 786 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 RPL7AP62424 266 aaKnown RBP9.9□□□□□ -0.83
HDAC3-205ENST00000469550 ZNF252P-AS1Q0IIN9 211 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 MAP7Q14244 749 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 DBN1Q16643 649 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 TIGD5Q53EQ6 642 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 SH2D4BQ5SQS7 431 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 ZFYVE27Q5T4F4 411 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 FAM102BQ5T8I3 360 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 TTC39BQ5VTQ0 682 aaPredicted RBP9.9□□□□□ -0.83
HDAC3-205ENST00000469550 BBS12Q6ZW61 710 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 DHDDSQ86SQ9 333 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 SLC26A11Q86WA9 606 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 JADE3Q92613 823 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 E2F7Q96AV8 911 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 CDHR1Q96JP9 859 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 C17orf80Q9BSJ5 609 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 STN1Q9H668 368 aaKnown RBP9.9□□□□□ -0.83
HDAC3-205ENST00000469550 GPRC5CQ9NQ84 441 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 KMT5AQ9NQR1 393 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 KLHL11Q9NVR0 708 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 PPARGC1AQ9UBK2 798 aaKnown RBP9.9□□□□□ -0.83
HDAC3-205ENST00000469550 SOX13Q9UN79 622 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 PLLPQ9Y342 182 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 NRCAMQ92823 1304 aa9.9□□□□□ -0.83
HDAC3-205ENST00000469550 BRWD1Q9NSI6 2320 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 A0A088AWK7 358 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 TCRBV9S1A1TA0A576 114 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 C3orf70A6NLC5 250 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 H3BNC9 293 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 EXTL3O43909 919 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 CCNT2O60583 730 aaKnown RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 TMEM63AO94886 807 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 RPLP2P05387 115 aaKnown RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 CFHP08603 1231 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 TCF4P15884 667 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 KCNA2P16389 499 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 CPOXP36551 454 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 CPA2P48052 419 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 JAK3P52333 1124 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 IRX4P78413 519 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 GAD2Q05329 585 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 BST1Q10588 318 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 WASHC5Q12768 1159 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 PUS10Q3MIT2 529 aaKnown RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 BBS9Q3SYG4 887 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 EFHC1Q5JVL4 640 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 LGSNQ5TDP6 509 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 TAF2Q6P1X5 1199 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 PRPF39Q86UA1 669 aaKnown RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 RASSF3Q86WH2 238 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 THNSL1Q8IYQ7 743 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 ALDH16A1Q8IZ83 802 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 FBXO27Q8NI29 283 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 ACTL9Q8TC94 416 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 BTBD9Q96Q07 612 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 SRPK1Q96SB4 655 aaKnown RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 TTC1Q99614 292 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 FRMD8Q9BZ67 464 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 ZNF518BQ9C0D4 1074 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 KLHL4Q9C0H6 718 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 IQCGQ9H095 443 aaKnown RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 ZCWPW1Q9H0M4 648 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 EBF3Q9H4W6 596 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 SETD4Q9NVD3 440 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 CHCHD3Q9NX63 227 aaKnown RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 CIDEBQ9UHD4 219 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 XPO7Q9UIA9 1087 aaKnown RBP9.89□□□□□ -0.83
HDAC3-205ENST00000469550 PPM1HQ9ULR3 514 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 PCDHB4Q9Y5E5 795 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 GMEB1Q9Y692 573 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 TEX264Q9Y6I9 313 aa9.89□□□□□ -0.83
HDAC3-205ENST00000469550 MBLAC1A4D2B0 266 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 C2orf71A6NGG8 1288 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 E5RJQ4 531 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 F8VP50 259 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 H0YCG3 227 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 BIRC5O15392 142 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 SNNO75324 88 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 KRT37O76014 449 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 BAG2O95816 211 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 PYGLP06737 847 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 SNRPAP09012 282 aaKnown RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 SFNP31947 248 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 RANBP1P43487 201 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 OTUD4Q01804 1114 aaKnown RBP9.88□□□□□ -0.83
HDAC3-205ENST00000469550 MGAT3Q09327 533 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 XKR9Q5GH70 373 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 FAM117BQ6P1L5 589 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 TRIM50Q86XT4 487 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 CRLF3Q8IUI8 442 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 PASD1Q8IV76 773 aa9.88□□□□□ -0.83
HDAC3-205ENST00000469550 RSAD2Q8WXG1 361 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms