RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 VPS16Q9H269 839 aa3.63□□□□□ -1.83
TPR-204ENST00000469463 CDCP1Q9H5V8 836 aa3.63□□□□□ -1.83
TPR-204ENST00000469463 RAB21Q9UL25 225 aa3.63□□□□□ -1.83
TPR-204ENST00000469463 TRPC5Q9UL62 973 aaPredicted RBP3.63□□□□□ -1.83
TPR-204ENST00000469463 DTNAQ9Y4J8 743 aa3.63□□□□□ -1.83
TPR-204ENST00000469463 GOLGA6L3A6NEY3 463 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 MYMKA6NI61 221 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 CTIFO43310 598 aaKnown RBP3.62□□□□□ -1.83
TPR-204ENST00000469463 PPP6R2O75170 966 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 PEX14O75381 377 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 MBPP02686 304 aaPredicted RBP3.62□□□□□ -1.83
TPR-204ENST00000469463 ALDOAP04075 364 aaKnown RBP3.62□□□□□ -1.83
TPR-204ENST00000469463 ANXA6P08133 673 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 SNHG28P0DPA3 235 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 ATP5F1P24539 256 aaPredicted RBP3.62□□□□□ -1.83
TPR-204ENST00000469463 DUSP1P28562 367 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 GRK5P34947 590 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 NR4A2P43354 598 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 HTR3AP46098 478 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 CPA2P48052 419 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 RGS19P49795 217 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 AGTR2P50052 363 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 SF3A3Q12874 501 aaKnown RBP eCLIP3.62□□□□□ -1.83
TPR-204ENST00000469463 GAB1Q13480 694 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 BLMHQ13867 455 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 SPARCL1Q14515 664 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 TRIP6Q15654 476 aaKnown RBP3.62□□□□□ -1.83
TPR-204ENST00000469463 PFKFB4Q16877 469 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 FAM110CQ1W6H9 321 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 ANXA2RQ3ZCQ2 193 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 SLC9C1Q4G0N8 1177 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 CCDC38Q502W7 563 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 ZNF569Q5MCW4 686 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 ACSM6Q6P461 480 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 SHC4Q6S5L8 630 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 C16orf89Q6UX73 402 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 SPICE1Q8N0Z3 855 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 SAMD3Q8N6K7 520 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 FAM71BQ8TC56 605 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 PIGOQ8TEQ8 1089 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 KAT2BQ92831 832 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 MCRS1Q96EZ8 462 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 GPR78Q96P69 363 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 FCRL5Q96RD9 977 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 SENP7Q9BQF6 1050 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 ABHD14AQ9BUJ0 271 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 ELOVL1Q9BW60 279 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 DACT1Q9NYF0 836 aa3.62□□□□□ -1.83
TPR-204ENST00000469463 IPO11Q9UI26 975 aaKnown RBP3.62□□□□□ -1.83
TPR-204ENST00000469463 SIRT4Q9Y6E7 314 aaPredicted RBP3.62□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3DA0A087WVF3 549 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3IA0A087WXS9 549 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3EA0A087X179 549 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3KA0A087X1G2 549 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3BA6NDS4 549 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3FA6NER0 549 aaPredicted RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 OR2W5A6NFC9 320 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3LB9A6J9 549 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 M0QYT0 321 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 PRYO14603 147 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 RRHO14718 337 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 PLAUP00749 431 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 ITGA2BP08514 1039 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 CD63P08962 238 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3HP0C7X1 549 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 ATF7P17544 494 aaPredicted RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 STAT6P42226 847 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 ID2Q02363 134 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 BIRC2Q13490 618 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 RABEP1Q15276 862 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TIGD6Q17RP2 521 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 ZACNQ401N2 412 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 C10orf62Q5T681 223 aaPredicted RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 ATPAF1Q5TC12 328 aaPredicted RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3GQ6DHY5 549 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 SULT6B1Q6IMI4 303 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3CQ6IPX1 549 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 WDR93Q6P2C0 686 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 KYAT3Q6YP21 454 aaKnown RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 ANKRD13BQ86YJ7 626 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 CCDC117Q8IWD4 279 aaPredicted RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 SAMD14Q8IZD0 417 aaPredicted RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 TBC1D3Q8IZP1 549 aaPredicted RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 NANOGP1Q8N7R0 232 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 NPIPB3Q92617 1050 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 RUBCNQ92622 972 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 CELF1Q92879 486 aaKnown RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 C3orf49Q96BT1 292 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TRMT61AQ96FX7 289 aaKnown RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 RPS6KC1Q96S38 1066 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 RMDN3Q96TC7 470 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 GDF15Q99988 308 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 TMEM120AQ9BXJ8 343 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 ELAC1Q9H777 363 aaKnown RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 SEPSECSQ9HD40 501 aaKnown RBP3.61□□□□□ -1.83
TPR-204ENST00000469463 TMEM184CQ9NVA4 438 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 SLC52A1Q9NWF4 448 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 ZNF580Q9UK33 172 aa3.61□□□□□ -1.83
TPR-204ENST00000469463 SLC22A23A1A5C7 686 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms