RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 DGKAP23743 735 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 DDIT3P35638 169 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 MLLT10P55197 1068 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 NFKBIBQ15653 356 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 C1QL3Q5VWW1 255 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 OVCA2Q8WZ82 227 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 POM121Q96HA1 1249 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 PCED1BQ96HM7 432 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 C8orf48Q96LL4 319 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 TIPINQ9BVW5 301 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 FBRSQ9HAH7 460 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 CRTAC1Q9NQ79 661 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 CHMP5Q9NZZ3 219 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 DKK3Q9UBP4 350 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 KCNG1Q9UIX4 513 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 TUBD1Q9UJT1 453 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 FBXO10Q9UK96 956 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 CDH9Q9ULB4 789 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 SPG11Q96JI7 2443 aa11.13□□□□□ -0.63
TRAIP-202ENST00000469027 CELSR1Q9NYQ6 3014 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 SPENQ96T58 3664 aaKnown RBP11.12□□□□□ -0.63
TRAIP-202ENST00000469027 ABCA2Q9BZC7 2435 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 LZTS3O60299 673 aaPredicted RBP11.12□□□□□ -0.63
TRAIP-202ENST00000469027 SEMA7AO75326 666 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 RTN3O95197 1032 aaPredicted RBP11.12□□□□□ -0.63
TRAIP-202ENST00000469027 ITGB3P05106 788 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 KRT19P08727 400 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 PLCG1P19174 1290 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 TRAPPC10P48553 1259 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 TOB1P50616 345 aaPredicted RBP11.12□□□□□ -0.63
TRAIP-202ENST00000469027 NCKAP1LP55160 1127 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 TFAMQ00059 246 aaKnown RBP11.12□□□□□ -0.63
TRAIP-202ENST00000469027 KCNJ12Q14500 433 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 MDH1BQ5I0G3 518 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 NUP93Q8N1F7 819 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 OR2T34Q8NGX1 318 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 GOLGA1Q92805 767 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 KCNN1Q92952 543 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 SEL1LQ9UBV2 794 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 PLA2G4CQ9UP65 541 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 PCDHB11Q9Y5F2 797 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 SVILO95425 2214 aa11.12□□□□□ -0.63
TRAIP-202ENST00000469027 A0A0B4J269 797 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 NPHP3-ACAD11A0A0J9YXS1 232 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 A0A1W2PP55 124 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 H0YCG3 227 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 GABRDO14764 452 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 PLD2O14939 933 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 GREM1O60565 184 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 TLR5O60602 858 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 DIAPH2O60879 1101 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 RNASEH2AO75792 299 aaKnown RBP11.11□□□□□ -0.63
TRAIP-202ENST00000469027 WT1P19544 449 aaPredicted RBP11.11□□□□□ -0.63
TRAIP-202ENST00000469027 LMO2P25791 158 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 TUBP50607 506 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 SLC12A3P55017 1021 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 CDKN3Q16667 212 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 KRT79Q5XKE5 535 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 CAPRIN2Q6IMN6 1127 aaKnown RBP11.11□□□□□ -0.63
TRAIP-202ENST00000469027 NAPEPLDQ6IQ20 393 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 SLC39A4Q6P5W5 647 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 USP30Q70CQ3 517 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 HEATR4Q86WZ0 1026 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 FBXO39Q8N4B4 442 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 TOP6BLQ8N6T0 577 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 EFCAB3Q8N7B9 438 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 MFSD2AQ8NA29 543 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 CYB5D2Q8WUJ1 264 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 C8orf76Q96K31 380 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 OMDQ99983 421 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 PABPC3Q9H361 631 aaKnown RBP11.11□□□□□ -0.63
TRAIP-202ENST00000469027 USP29Q9HBJ7 922 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 EPB41L5Q9HCM4 733 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 PRSS16Q9NQE7 514 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 CUEDC1Q9NWM3 386 aaPredicted RBP11.11□□□□□ -0.63
TRAIP-202ENST00000469027 SERGEFQ9UGK8 458 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 PCDHGA7Q9Y5G6 932 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 SDK2Q58EX2 2172 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 MED13LQ71F56 2210 aa11.11□□□□□ -0.63
TRAIP-202ENST00000469027 DOCK9Q9BZ29 2069 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.1□□□□□ -0.63
TRAIP-202ENST00000469027 RNASEH1O60930 286 aaKnown RBP11.1□□□□□ -0.63
TRAIP-202ENST00000469027 PIGRP01833 764 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 CCR5P51681 352 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 CACNA2D1P54289 1103 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 ZNF177Q13360 481 aaPredicted RBP11.1□□□□□ -0.63
TRAIP-202ENST00000469027 ESPL1Q14674 2120 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 STAT4Q14765 748 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 SOWAHAQ2M3V2 549 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 ARSHQ5FYA8 562 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 HYIQ5T013 277 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 EFL1Q7Z2Z2 1120 aaKnown RBP11.1□□□□□ -0.63
TRAIP-202ENST00000469027 DSG4Q86SJ6 1040 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 CSGALNACT2Q8N6G5 542 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 SYT2Q8N9I0 419 aaPredicted RBP11.1□□□□□ -0.63
TRAIP-202ENST00000469027 FBXO18Q8NFZ0 1043 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 SCAMP5Q8TAC9 235 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 P2RY11Q96G91 374 aa11.1□□□□□ -0.63
TRAIP-202ENST00000469027 PIWIL1Q96J94 861 aaKnown RBP11.1□□□□□ -0.63
TRAIP-202ENST00000469027 KLF16Q9BXK1 252 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms