RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-210	ENST00000468965	ZNF510	Q9Y2H8	683 aa		13.58	□□□□□ -0.24
SCAP-210	ENST00000468965	SNX10	Q9Y5X0	201 aa		13.58	□□□□□ -0.24
SCAP-210	ENST00000468965	GRID2IP	A4D2P6	1211 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	USP27X	A6NNY8	438 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	TRDMT1	O14717	391 aa	Known RBP	13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	ZNF500	O60304	480 aa	Predicted RBP	13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	DES	P17661	470 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	SLC11A2	P49281	568 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	TAS2R40	P59535	323 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	SLC25A11	Q02978	314 aa	Known RBP	13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	TNK2	Q07912	1038 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	SCAP	Q12770	1279 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	MS4A13	Q5J8X5	152 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	C11orf63	Q6NUN7	778 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	RFWD3	Q6PCD5	774 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	RNF135	Q8IUD6	432 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	YAF2	Q8IY57	180 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	GJD3	Q8N144	294 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	CPXM2	Q8N436	756 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	LRRC57	Q8N9N7	239 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	OTUB2	Q96DC9	234 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	PRMT1	Q99873	361 aa	Known RBP	13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	SNRNP25	Q9BV90	132 aa	Known RBP	13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	TSGA10	Q9BZW7	698 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	EBF3	Q9H4W6	596 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	LZTFL1	Q9NQ48	299 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	GPATCH2L	Q9NWQ4	482 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	THG1L	Q9NWX6	298 aa	Known RBP	13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	LCMT1	Q9UIC8	334 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	USP18	Q9UMW8	372 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	GUCA1B	Q9UMX6	200 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	HYOU1	Q9Y4L1	999 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	HS3ST4	Q9Y661	456 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	CAPN6	Q9Y6Q1	641 aa		13.57	□□□□□ -0.24
SCAP-210	ENST00000468965	OTOL1	A6NHN0	477 aa	Predicted RBP	13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	SLC9A3R1	O14745	358 aa	Predicted RBP	13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	KRT86	O43790	486 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	PRPSAP2	O60256	369 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	CYP17A1	P05093	508 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	TACR2	P21452	398 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	COMT	P21964	271 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	SGSH	P51688	502 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	TDG	Q13569	410 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	PDGFRL	Q15198	375 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	CA9	Q16790	459 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	GAB4	Q2WGN9	574 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	ADGRF1	Q5T601	910 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	RAP1GAP2	Q684P5	730 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	SLFN11	Q7Z7L1	901 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	C14orf80	Q86SX3	495 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	CHSY1	Q86X52	802 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	ZNF683	Q8IZ20	524 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	ADGRG2	Q8IZP9	1017 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	PYROXD2	Q8N2H3	581 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	HAPLN3	Q96S86	360 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	NCAPG	Q9BPX3	1015 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	BRD9	Q9H8M2	597 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	TRMT1	Q9NXH9	659 aa	Known RBP	13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	SLC12A6	Q9UHW9	1150 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	ALG6	Q9Y672	507 aa		13.56	□□□□□ -0.24
SCAP-210	ENST00000468965	GOLGA6L9	A6NEM1	432 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	TSPAN3	O60637	253 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	SRF	P11831	508 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	GJC1	P36383	396 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	SLC1A1	P43005	524 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	IRAK1	P51617	712 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	MLLT6	P55198	1093 aa	Predicted RBP	13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	NAP1L1	P55209	391 aa	Known RBP	13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	RUNX3	Q13761	415 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	DHCR24	Q15392	516 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	SMTNL2	Q2TAL5	461 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	ARL13B	Q3SXY8	428 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	ATP13A4	Q4VNC1	1196 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	LY6G5C	Q5SRR4	150 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	ERMARD	Q5T6L9	678 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	IER5L	Q5T953	404 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	MANEAL	Q5VSG8	457 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	RHBDF2	Q6PJF5	856 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	TPGS1	Q6ZTW0	290 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	DAAM2	Q86T65	1068 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	TMEM25	Q86YD3	366 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	LGI2	Q8N0V4	545 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	RNF10	Q8N5U6	811 aa	Known RBP	13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	ATP2A3	Q93084	1043 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	CALR3	Q96L12	384 aa	Known RBP	13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	SIK2	Q9H0K1	926 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	OSBPL2	Q9H1P3	480 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	ECT2	Q9H8V3	914 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	ZWILCH	Q9H900	591 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	SPHK2	Q9NRA0	654 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	GTSE1	Q9NYZ3	720 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	DUSP12	Q9UNI6	340 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	AP4E1	Q9UPM8	1137 aa		13.55	□□□□□ -0.24
SCAP-210	ENST00000468965	TECTA	O75443	2155 aa		13.54	□□□□□ -0.24
SCAP-210	ENST00000468965	FAM72C	H0Y354	149 aa		13.54	□□□□□ -0.24
SCAP-210	ENST00000468965	PALM	O75781	387 aa		13.54	□□□□□ -0.24
SCAP-210	ENST00000468965	NFATC1	O95644	943 aa		13.54	□□□□□ -0.24
SCAP-210	ENST00000468965	RARA	P10276	462 aa		13.54	□□□□□ -0.24
SCAP-210	ENST00000468965	CHKA	P35790	457 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms