RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 XPO6Q96QU8 1125 aaKnown RBP11.62□□□□□ -0.55
COL4A6-205ENST00000468338 ERGIC2Q96RQ1 377 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 CPXM1Q96SM3 734 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 LSM14BQ9BX40 385 aaKnown RBP11.62□□□□□ -0.55
COL4A6-205ENST00000468338 IRX2Q9BZI1 471 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-205ENST00000468338 MIS12Q9H081 205 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 ST7Q9NRC1 585 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 TJP2Q9UDY2 1190 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 EBF1Q9UH73 591 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 MMP17Q9ULZ9 603 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 SLC27A6Q9Y2P4 619 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 NEDD8-MDP1E9PL57 170 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 F8VZ95 297 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 PES1O00541 588 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 EPHB6O15197 1021 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 MSI1O43347 362 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 HARS2P49590 506 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 KLK7P49862 253 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 JAM2P57087 298 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 ZNF445P59923 1031 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 YWHAZP63104 245 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 SH3BP2P78314 561 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 CRY1Q16526 586 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 OCLNQ16625 522 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 ANO6Q4KMQ2 910 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 C2orf27AQ580R0 203 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 ADGRF1Q5T601 910 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 EMC10Q5UCC4 262 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 SYPL2Q5VXT5 272 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 CAVIN1Q6NZI2 390 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 DNAJC14Q6Y2X3 702 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 RASSF3Q86WH2 238 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 DHX40Q8IX18 779 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 DQX1Q8TE96 717 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 GOLGA1Q92805 767 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 PIWIL1Q96J94 861 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 PPP1R13BQ96KQ4 1090 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 FCRL2Q96LA5 508 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 TRIM62Q9BVG3 475 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 NAT10Q9H0A0 1025 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 POPDC2Q9HBU9 364 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 DNAJC17Q9NVM6 304 aaKnown RBP11.61□□□□□ -0.55
COL4A6-205ENST00000468338 ASNSD1Q9NWL6 643 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 SLC8A2Q9UPR5 921 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 NAALADL1Q9UQQ1 740 aa11.61□□□□□ -0.55
COL4A6-205ENST00000468338 ZNF292O60281 2723 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 TBC1D3BA6NDS4 549 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 PRRT4C9JH25 899 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 ADAM23O75077 832 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 APBB3O95704 486 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 TPM2P07951 284 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 NCAM1P13591 858 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 ATP1A3P13637 1013 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 HNRNPLP14866 589 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■■■■□ 21.2
COL4A6-205ENST00000468338 KRT9P35527 623 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 SCNN1AP37088 669 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 GABRB2P47870 512 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 DGKGP49619 791 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 KDSRQ06136 332 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 RAPGEF1Q13905 1077 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 SYCP1Q15431 976 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 TAF5Q15542 800 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 PTPN20Q4JDL3 420 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 FAM133BQ5BKY9 247 aaKnown RBP11.6□□□□□ -0.55
COL4A6-205ENST00000468338 FKBP15Q5T1M5 1219 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 NUGGCQ68CJ6 796 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 GRAMD4Q6IC98 578 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 OLFML1Q6UWY5 402 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 TOGARAM2Q6ZUX3 1019 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 NOP9Q86U38 636 aaKnown RBP11.6□□□□□ -0.55
COL4A6-205ENST00000468338 PASD1Q8IV76 773 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 UNC45BQ8IWX7 931 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 ALLCQ8N6M5 410 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 AOPEPQ8N6M6 819 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 C1orf131Q8NDD1 294 aaKnown RBP11.6□□□□□ -0.55
COL4A6-205ENST00000468338 ANKRD20A12PQ8NF67 263 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 ZNF397Q8NF99 534 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-205ENST00000468338 FAM149B1Q96BN6 582 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 SERPINB11Q96P15 392 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 NOX5Q96PH1 765 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 SLC2A13Q96QE2 648 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 KCTD15Q96SI1 283 aaPredicted RBP11.6□□□□□ -0.55
COL4A6-205ENST00000468338 SLC2A11Q9BYW1 496 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 CD248Q9HCU0 757 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 PLK2Q9NYY3 685 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 CLEC4EQ9ULY5 219 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 TLR6Q9Y2C9 796 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 ABCA7Q8IZY2 2146 aa11.6□□□□□ -0.55
COL4A6-205ENST00000468338 SGK1O00141 431 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 IRAK2O43187 625 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 ERBB2P04626 1255 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 HOXD9P28356 352 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-205ENST00000468338 SOX5P35711 763 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 DGKEP52429 567 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 TBX4P57082 545 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 RAB15P59190 212 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 POLR2FP61218 127 aaKnown RBP11.59□□□□□ -0.55
COL4A6-205ENST00000468338 IQCB1Q15051 598 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 MPPE1Q53F39 396 aa11.59□□□□□ -0.55
COL4A6-205ENST00000468338 EFHC1Q5JVL4 640 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms