RNA–Protein interactions for RNA: ENST00000468275.5

APTX-215, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,455 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-215ENST00000468275 CXCL16Q9H2A7 254 aa12.52□□□□□ -0.41
APTX-215ENST00000468275 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
APTX-215ENST00000468275 SLC38A7Q9NVC3 462 aa12.52□□□□□ -0.41
APTX-215ENST00000468275 FAM86C1Q9NVL1 165 aa12.52□□□□□ -0.41
APTX-215ENST00000468275 PSMC3IPQ9P2W1 217 aaPredicted RBP12.52□□□□□ -0.41
APTX-215ENST00000468275 IPPQ9Y573 584 aa12.52□□□□□ -0.41
APTX-215ENST00000468275 MRPL42Q9Y6G3 142 aaKnown RBP12.52□□□□□ -0.41
APTX-215ENST00000468275 ZFHX2Q9C0A1 2572 aaPredicted RBP12.51□□□□□ -0.41
APTX-215ENST00000468275 MYO15AQ9UKN7 3530 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 KMT2EQ8IZD2 1858 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 GOLGA6L7A0A1B0GV03 622 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 A8MXQ7 604 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 APOL1O14791 398 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 TRIM66O15016 1216 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 SNX3O60493 162 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 TMEM63AO94886 807 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 IFNB1P01574 187 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 GNL1P36915 607 aaPredicted RBP12.51□□□□□ -0.41
APTX-215ENST00000468275 AIF1P55008 147 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 GEMIN4P57678 1058 aaKnown RBP12.51□□□□□ -0.41
APTX-215ENST00000468275 GPX6P59796 221 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 ZXDAP98168 799 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 CAMK1Q14012 370 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 C15orf59Q2T9L4 293 aaPredicted RBP12.51□□□□□ -0.41
APTX-215ENST00000468275 CLLU1OSQ5K130 101 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 MRPL10Q7Z7H8 261 aaKnown RBP12.51□□□□□ -0.41
APTX-215ENST00000468275 ZBED8Q8IZ13 594 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 LRRC43Q8N309 656 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 FBXL6Q8N531 539 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 APPL2Q8NEU8 664 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 OR6B3Q8NGW1 331 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 PCDH19Q8TAB3 1148 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 HSPH1Q92598 858 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 SAMD15Q9P1V8 674 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 CTNNAL1Q9UBT7 734 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 PATJQ8NI35 1801 aa12.51□□□□□ -0.41
APTX-215ENST00000468275 LOC730098B7Z3J9 87 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 RASA4BC9J798 803 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 SPTLC1O15269 473 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 RASA4O43374 803 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 GFRA3O60609 400 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 DAB1O75553 588 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 ASMTLO95671 621 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 MAGEA3P43357 314 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 LILRA4P59901 499 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 DYNLT1P63172 113 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 ACTN3Q08043 901 aaPredicted RBP12.5□□□□□ -0.41
APTX-215ENST00000468275 MPP2Q14168 576 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 KRT81Q14533 505 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 FASTKD3Q14CZ7 662 aaKnown RBP12.5□□□□□ -0.41
APTX-215ENST00000468275 SH3PXD2AQ5TCZ1 1133 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 ANKRD22Q5VYY1 191 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 GLB1LQ6UWU2 654 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 CCDC121Q6ZUS5 278 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 CDKL3Q8IVW4 592 aaPredicted RBP12.5□□□□□ -0.41
APTX-215ENST00000468275 C10orf67Q8IYJ2 551 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 LRRC34Q8IZ02 419 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 TMEM86AQ8N2M4 240 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 SMRP1Q8NCR6 262 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.5□□□□□ -0.41
APTX-215ENST00000468275 PYROXD1Q8WU10 500 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 MZB1Q8WU39 189 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 LPPQ93052 612 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 WDR83Q9BRX9 315 aaKnown RBP12.5□□□□□ -0.41
APTX-215ENST00000468275 MRPL9Q9BYD2 267 aaKnown RBP12.5□□□□□ -0.41
APTX-215ENST00000468275 SNX25Q9H3E2 840 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 RABEP2Q9H5N1 569 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 NRDE2Q9H7Z3 1164 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 DNAJC17Q9NVM6 304 aaKnown RBP12.5□□□□□ -0.41
APTX-215ENST00000468275 NKIRAS1Q9NYS0 192 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 CLEC1BQ9P126 229 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 SAE1Q9UBE0 346 aaPredicted RBP12.5□□□□□ -0.41
APTX-215ENST00000468275 HES2Q9Y543 173 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 USP3Q9Y6I4 520 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 TEX264Q9Y6I9 313 aa12.5□□□□□ -0.41
APTX-215ENST00000468275 MEIS3P2A8K0S8 358 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 HACD1B0YJ81 288 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 PTGESO14684 152 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 TYROBPO43914 113 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 HUS1O60921 280 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 GCATO75600 419 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 TPSB2P20231 275 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 DNAJB1P25685 340 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 L1CAMP32004 1257 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 MATKP42679 507 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 BCAR1P56945 870 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 IL9RQ01113 521 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 SOX4Q06945 474 aaPredicted RBP12.49□□□□□ -0.41
APTX-215ENST00000468275 IFT88Q13099 833 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 TPSAB1Q15661 275 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 SPOUT1Q5T280 376 aaKnown RBP12.49□□□□□ -0.41
APTX-215ENST00000468275 AGMOQ6ZNB7 445 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 CYS1Q717R9 158 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 BZW1Q7L1Q6 419 aaKnown RBP12.49□□□□□ -0.41
APTX-215ENST00000468275 ADGRD2Q7Z7M1 963 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 SCUBE3Q8IX30 993 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 CCDC13Q8IYE1 715 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 HACE1Q8IYU2 909 aa12.49□□□□□ -0.41
APTX-215ENST00000468275 ADGRF2Q8IZF7 708 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms