RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 COL4A2P08572 1712 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 TENM4Q6N022 2769 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 TDRD15B5MCY1 1934 aaKnown RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 APC2O95996 2303 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 GSTTP1A0A1W2PQM5 241 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 KANSL1LA0AUZ9 987 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 ZNF891A8MT65 544 aaPredicted RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 GOLGA6L6A8MZA4 724 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 DVL2O14641 736 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 RETP07949 1114 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 KCNA2P16389 499 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 SLC9A1P19634 815 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 SOX5P35711 763 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 NT5C2P49902 561 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 METAP2P50579 478 aaKnown RBP eCLIP4.66□□□□□ -1.66
SSR3-204ENST00000467733 CLCN4P51793 760 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 BCAR1P56945 870 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 ATP2C1P98194 919 aaPredicted RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 SLC6A3Q01959 620 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 DSG1Q02413 1049 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 TRAF1Q13077 416 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 PTPAQ15257 358 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 PCBP1Q15365 356 aaKnown RBP eCLIP4.66□□□□□ -1.66
SSR3-204ENST00000467733 GAGE13Q4V321 117 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 CCDC178Q5BJE1 867 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 RABL3Q5HYI8 236 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 CT47A1Q5JQC4 288 aaPredicted RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 CLLU1OSQ5K130 101 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 FAM111BQ6SJ93 734 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 CYP26C1Q6V0L0 522 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 MFSD6Q6ZSS7 791 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 HTR3DQ70Z44 454 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 GAREM2Q75VX8 874 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 FAM228AQ86W67 206 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 BCL6BQ8N143 479 aaPredicted RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 NXPE1Q8N323 547 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 ZNF276Q8N554 614 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 CHTF18Q8WVB6 975 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 TRAPPC12Q8WVT3 735 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 SEPT1Q8WYJ6 367 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 RSPH1Q8WYR4 309 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 ESR2Q92731 530 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 TNPO1Q92973 898 aaKnown RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 USP7Q93009 1102 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 FOXRED1Q96CU9 486 aaPredicted RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 CDHR1Q96JP9 859 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 TUBGCP5Q96RT8 1024 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 PCYT2Q99447 389 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 FAM126AQ9BYI3 521 aaPredicted RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 RNF41Q9H4P4 317 aaPredicted RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 KAT14Q9H8E8 782 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 VAT1LQ9HCJ6 419 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 WDR6Q9NNW5 1121 aaKnown RBP4.66□□□□□ -1.66
SSR3-204ENST00000467733 ZBTB40Q9NUA8 1239 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 ZNHIT2Q9UHR6 403 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 RAB23Q9ULC3 237 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 SPTA1P02549 2419 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 TTC41PQ6P2S7 1318 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 TICRRQ7Z2Z1 1910 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 CACNA1EQ15878 2313 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 CFAP46Q8IYW2 2715 aa4.66□□□□□ -1.66
SSR3-204ENST00000467733 NOTCH4Q99466 2003 aa4.65□□□□□ -1.66
SSR3-204ENST00000467733 TMEM8BA6NDV4 472 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 NT5C1B-RDH14C9J2C7 533 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 ANHXE9PGG2 379 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 FAM20BO75063 409 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 ZC3H11AO75152 810 aaKnown RBP eCLIP4.65□□□□□ -1.67
SSR3-204ENST00000467733 IPO13O94829 963 aaKnown RBP4.65□□□□□ -1.67
SSR3-204ENST00000467733 FGAP02671 866 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 TDGF1P13385 188 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 CD40P25942 277 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 PTX3P26022 381 aaPredicted RBP4.65□□□□□ -1.67
SSR3-204ENST00000467733 RPS9P46781 194 aaKnown RBP4.65□□□□□ -1.67
SSR3-204ENST00000467733 LSSP48449 732 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 ALDH7A1P49419 539 aaKnown RBP4.65□□□□□ -1.67
SSR3-204ENST00000467733 LIMK1P53667 647 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 HAND2P61296 217 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 LRRC32Q14392 662 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 UBXN2BQ14CS0 331 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 WTAPQ15007 396 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 PLCB4Q15147 1175 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 MLF2Q15773 248 aaPredicted RBP4.65□□□□□ -1.67
SSR3-204ENST00000467733 N4BP2L1Q5TBK1 243 aaPredicted RBP4.65□□□□□ -1.67
SSR3-204ENST00000467733 PRAMEF9Q5VWM5 478 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 IL31Q6EBC2 164 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 MTHFD1LQ6UB35 978 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 TMEM173Q86WV6 379 aaPredicted RBP4.65□□□□□ -1.67
SSR3-204ENST00000467733 IQCA1Q86XH1 822 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 ECHDC2Q86YB7 292 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 KIAA0319LQ8IZA0 1049 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 ENAHQ8N8S7 591 aaPredicted RBP4.65□□□□□ -1.67
SSR3-204ENST00000467733 CHAC2Q8WUX2 184 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 IGSF21Q96ID5 467 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 C16orf92Q96LL3 132 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 VN1R3Q9BXE9 311 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 AZI2Q9H6S1 392 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 CAAP1Q9H8G2 361 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 LTB4R2Q9NPC1 389 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 MAN1C1Q9NR34 630 aa4.65□□□□□ -1.67
SSR3-204ENST00000467733 SEMA4GQ9NTN9 838 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms