RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 DUOXA1Q1HG43 343 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 TRIM61Q5EBN2 209 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 TAF3Q5VWG9 929 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 SMYD5Q6GMV2 418 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 PSAPL1Q6NUJ1 521 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 TMEM110Q86TL2 294 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 CHPFQ8IZ52 775 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 NEK11Q8NG66 645 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 RLN3Q8WXF3 142 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 BHMTQ93088 406 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 PPP1R13BQ96KQ4 1090 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 GANQ9H2C0 597 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 MBD1Q9UIS9 605 aaPredicted RBP14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 PILRBQ9UKJ0 227 aa14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 AGO1Q9UL18 857 aaKnown RBP14.65□□□□□ -0.06
CCHCR1-211ENST00000467553 MAP1BP46821 2468 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 A0A1W2PQF6 199 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 FAM170AA1A519 330 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 ANTXRLA6NF34 631 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 CAPN9O14815 690 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 PAPSS1O43252 624 aaPredicted RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 SART1O43290 800 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 MSI1O43347 362 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 CISD3P0C7P0 127 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 CYP11B1P15538 503 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 GABRG2P18507 467 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 HARS2P49590 506 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 NOVA1P51513 510 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 IRX4P78413 519 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 PDCLQ13371 301 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 SKOR2Q2VWA4 1001 aaPredicted RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 METTL3Q86U44 580 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 TMEFF1Q8IYR6 380 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 C1orf131Q8NDD1 294 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 IPO4Q8TEX9 1081 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 UCMAQ8WVF2 138 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 PLD4Q96BZ4 506 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 NOX5Q96PH1 765 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 FUCA2Q9BTY2 467 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 LHX5Q9H2C1 402 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 SLC32A1Q9H598 525 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 PLK2Q9NYY3 685 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 TJP2Q9UDY2 1190 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 NAALADL1Q9UQQ1 740 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 SIK3Q9Y2K2 1263 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 HBS1LQ9Y450 684 aaKnown RBP14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 CEP83Q9Y592 693 aa14.64□□□□□ -0.07
CCHCR1-211ENST00000467553 F8VZ95 297 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 TRIM24O15164 1050 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 EPHB6O15197 1021 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 TIMM44O43615 452 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 GFPT2O94808 682 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 PENKP01210 267 aaPredicted RBP14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 CYBBP04839 570 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 FYNP06241 537 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 ZNF445P59923 1031 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 RPL6Q02878 288 aaKnown RBP14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 TRIP4Q15650 581 aaPredicted RBP14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 EGFLAMQ63HQ2 1017 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 OR6B2Q6IFH4 312 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 MSANTD2Q6P1R3 559 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 APTXQ7Z2E3 356 aaKnown RBP14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 CPXM2Q8N436 756 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 FOXJ1Q92949 421 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 SPAG5Q96R06 1193 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 CPXM1Q96SM3 734 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 SLC2A11Q9BYW1 496 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 SYNCQ9H7C4 482 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 CD248Q9HCU0 757 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 SLC6A14Q9UN76 642 aa14.63□□□□□ -0.07
CCHCR1-211ENST00000467553 CEP295Q9C0D2 2601 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 GON4LQ3T8J9 2241 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 PATE3B3GLJ2 98 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 TEX33O43247 280 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 TSPAN3O60637 253 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 SERPINF2P08697 491 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 STAT1P42224 750 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 PTGER3P43115 390 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 ATXN3P54252 364 aaPredicted RBP14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 TBX4P57082 545 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 SNX16P57768 344 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 YWHAZP63104 245 aaKnown RBP14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 GFPT1Q06210 699 aaPredicted RBP14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 HNRNPDQ14103 355 aaKnown RBP14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 STARD3Q14849 445 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 IQCB1Q15051 598 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 EIF4HQ15056 248 aaKnown RBP14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 TAF5Q15542 800 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 FILIP1LQ4L180 1135 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 SYCP2LQ5T4T6 812 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 SH3PXD2AQ5TCZ1 1133 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 SYPL2Q5VXT5 272 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 NOP9Q86U38 636 aaKnown RBP14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 TMEM35BQ8NCS4 154 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 ADAM32Q8TC27 787 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 DQX1Q8TE96 717 aaKnown RBP14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 ZNF419Q96HQ0 510 aaPredicted RBP14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 ERGIC2Q96RQ1 377 aa14.62□□□□□ -0.07
CCHCR1-211ENST00000467553 IRX2Q9BZI1 471 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms