RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 TPGS2Q68CL5 300 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 DENND2CQ68D51 928 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 PDZD4Q76G19 769 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 TRMT10CQ7L0Y3 403 aaKnown RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 PPIL6Q8IXY8 311 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 VPS52Q8N1B4 723 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 FIBCD1Q8N539 461 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 TAB3Q8N5C8 712 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 OR2W6PQ8NHA6 318 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 ZNF461Q8TAF7 563 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 LRRN4Q8WUT4 740 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 TFB1MQ8WVM0 346 aaKnown RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 CPT1BQ92523 772 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 FCRL2Q96LA5 508 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 PWWP2AQ96N64 755 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 HAPLN3Q96S86 360 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 TTLL2Q9BWV7 592 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 EPB41L4BQ9H329 900 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 CDC42EP4Q9H3Q1 356 aaKnown RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 USP29Q9HBJ7 922 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.7□□□□□ -0.383e-13■□□□□ 9.7
HDLBP-231ENST00000467435 OR12D3Q9UGF7 316 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 TLR6Q9Y2C9 796 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 FARP1Q9Y4F1 1045 aaPredicted RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 PCDHB12Q9Y5F1 795 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 RAD54BQ9Y620 910 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 ANAPC1Q9H1A4 1944 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 GBF1Q92538 1859 aa12.7□□□□□ -0.38
HDLBP-231ENST00000467435 NYNRINQ9P2P1 1898 aaKnown RBP12.7□□□□□ -0.38
HDLBP-231ENST00000467435 DOCK4Q8N1I0 1966 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 H0YGN5 161 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 PPP1R12AO14974 1030 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-231ENST00000467435 RIPK2O43353 540 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 RNF40O75150 1001 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 ABLIM3O94929 683 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 SEC24AO95486 1093 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 MOCS2O96007 188 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-231ENST00000467435 APOEP02649 317 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 NUDT17P0C025 328 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 ZDHHC11BP0C7U3 371 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 VAV1P15498 845 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 EPHB2P29323 1055 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 SERPINB6P35237 376 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 TBX4P57082 545 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 CREMQ03060 361 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 ZNF844Q08AG5 666 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 RAB33AQ14088 237 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 PDK1Q15118 436 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 PRKD1Q15139 912 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-231ENST00000467435 C10orf120Q5SQS8 335 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 TMEM240Q5SV17 173 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 RASIP1Q5U651 963 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 ANKRD22Q5VYY1 191 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 HEATR6Q6AI08 1181 aaKnown RBP12.69□□□□□ -0.38
HDLBP-231ENST00000467435 HOOK3Q86VS8 718 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 NETO2Q8NC67 525 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 AUTS2Q8WXX7 1259 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 SLC39A13Q96H72 371 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 ZBED2Q9BTP6 218 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 ZBP1Q9H171 429 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 SEMA4AQ9H3S1 761 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 CYP4F11Q9HBI6 524 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 PRDM10Q9NQV6 1147 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 MRPL17Q9NRX2 175 aaKnown RBP12.69□□□□□ -0.38
HDLBP-231ENST00000467435 CXXC1Q9P0U4 656 aaPredicted RBP12.69□□□□□ -0.38
HDLBP-231ENST00000467435 STK39Q9UEW8 545 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 NEU3Q9UQ49 428 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 NFS1Q9Y697 457 aa12.69□□□□□ -0.38
HDLBP-231ENST00000467435 GOLGA6L10A6NI86 522 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 KCNU1A8MYU2 1149 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 SMAPO00193 183 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 POLR3GO15318 223 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-231ENST00000467435 FGF18O76093 207 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 TMEM63AO94886 807 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 LINC00271P0C7V0 271 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 SLC2A3P11169 496 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 HOXC13P31276 330 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 HTR7P34969 479 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 CA8P35219 290 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 IFFO1Q0D2I5 559 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 AP1B1Q10567 949 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 VEPH1Q14D04 833 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 TRIP4Q15650 581 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-231ENST00000467435 UBAP2Q5T6F2 1119 aaKnown RBP12.68□□□□□ -0.38
HDLBP-231ENST00000467435 MANEALQ5VSG8 457 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 C4orf22Q6V702 233 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 NPWQ8N729 165 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 NAT8LQ8N9F0 302 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 PDZD8Q8NEN9 1154 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 CCDC110Q8TBZ0 833 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 HTR3CQ8WXA8 447 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 OVCA2Q8WZ82 227 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 TBC1D31Q96DN5 1066 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 RBM15Q96T37 977 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDLBP-231ENST00000467435 UBE2OQ9C0C9 1292 aaKnown RBP12.68□□□□□ -0.38
HDLBP-231ENST00000467435 SIK2Q9H0K1 926 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 SAYSD1Q9NPB0 183 aa12.68□□□□□ -0.38
HDLBP-231ENST00000467435 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDLBP-231ENST00000467435 NINJ2Q9NZG7 142 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms