RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ZNF655Q8N720 491 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-207ENST00000467273 UBR7Q8N806 425 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 DEFB124Q8NES8 71 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 CCDC26Q8TAB7 109 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 EXOC6Q8TAG9 804 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 ZNF512Q96ME7 567 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-207ENST00000467273 UROC1Q96N76 676 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 FCRL3Q96P31 734 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-207ENST00000467273 BBC3Q96PG8 261 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-207ENST00000467273 TMEM209Q96SK2 561 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 SLC12A9Q9BXP2 914 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 NUSAP1Q9BXS6 441 aaKnown RBP5.93□□□□□ -1.46
PTCD3-207ENST00000467273 C22orf23Q9BZE7 217 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 C6orf50Q9HD87 102 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 ASAH2Q9NR71 780 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 C2orf42Q9NWW7 574 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 TRAF6Q9Y4K3 522 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 HES2Q9Y543 173 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 INSL5Q9Y5Q6 135 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 NUP210Q8TEM1 1887 aaPredicted RBP5.93□□□□□ -1.46
PTCD3-207ENST00000467273 PCNX2A6NKB5 2137 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 ACACAQ13085 2346 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 UNC79Q9P2D8 2635 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 CYP3A7-CYP3A51PA0A087WV96 503 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 A0A1B0GUA9 196 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 TRDMT1O14717 391 aaKnown RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 CHMP2AO43633 222 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 MOSPD3O75425 235 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 DNAJC8O75937 253 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 APBB3O95704 486 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 THBDP07204 575 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 SYPP08247 313 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 VAV1P15498 845 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 ARF4P18085 180 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 DRD1P21728 446 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 BDNFP23560 247 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 CYP3A7P24462 503 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 VIPR2P41587 438 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 CCR2P41597 374 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 QARSP47897 775 aaKnown RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 SIM1P81133 766 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 ROR1Q01973 937 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 SCAPQ12770 1279 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 PLD1Q13393 1074 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 BIRC2Q13490 618 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 PON2Q15165 354 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 NAB2Q15742 525 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 PFKFB3Q16875 520 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 ITPRIPL2Q3MIP1 535 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 Q4G0T1 1027 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 USP39Q53GS9 565 aaKnown RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 TMEM196Q5HYL7 178 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 GALNT18Q6P9A2 607 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 APOA5Q6Q788 366 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 C19orf48Q6RUI8 117 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 SYT13Q7L8C5 426 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 OTUD6AQ7L8S5 288 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 LRRTM3Q86VH5 581 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 MICU3Q86XE3 530 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 ADGRG2Q8IZP9 1017 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 SLC16A11Q8NCK7 471 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 FRS2Q8WU20 508 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 CHAC2Q8WUX2 184 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 ADAMTS14Q8WXS8 1223 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 PTPRN2Q92932 1015 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 TCEAL4Q96EI5 215 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 SCYL1Q96KG9 808 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 CEP170P1Q96L14 293 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 ZSWIM3Q96MP5 696 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 PAAF1Q9BRP4 392 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 TARS2Q9BW92 718 aaKnown RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 SLITRK6Q9H5Y7 841 aa5.92□□□□□ -1.46
PTCD3-207ENST00000467273 THG1LQ9NWX6 298 aaKnown RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 KIF26AQ9ULI4 1882 aaPredicted RBP5.92□□□□□ -1.46
PTCD3-207ENST00000467273 ASCC3Q8N3C0 2202 aaKnown RBP5.91□□□□□ -1.46
PTCD3-207ENST00000467273 ZNF462Q96JM2 2506 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 MYO18BQ8IUG5 2567 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 ARID2Q68CP9 1835 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 A0A087WV48 116 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 A0A1B0GTL3 188 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 CCDC196A0A1B0GTZ2 297 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 TMEM150BA6NC51 233 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 CASTOR2A6NHX0 329 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 H7C4K7 107 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 INO80B-WBP1J3KQ70 363 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 PTGESO14684 152 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 SYN3O14994 580 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 MATN3O15232 486 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 MEFVO15553 781 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-207ENST00000467273 B3GAT3O94766 335 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 GSTM1P09488 218 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 PLA2G2AP14555 144 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 RXRAP19793 462 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 AKAP5P24588 427 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 NOP2P46087 812 aaKnown RBP5.91□□□□□ -1.46
PTCD3-207ENST00000467273 PXNP49023 591 aaPredicted RBP5.91□□□□□ -1.46
PTCD3-207ENST00000467273 TBX4P57082 545 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 IRX4P78413 519 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 PTH1RQ03431 593 aa5.91□□□□□ -1.46
PTCD3-207ENST00000467273 MBTD1Q05BQ5 628 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms