RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 EPAS1Q99814 870 aa13.68□□□□□ -0.22
SEC22A-203ENST00000466950 TUBB2BQ9BVA1 445 aa13.68□□□□□ -0.22
SEC22A-203ENST00000466950 APOL5Q9BWW9 433 aa13.68□□□□□ -0.22
SEC22A-203ENST00000466950 DHX35Q9H5Z1 703 aaKnown RBP13.68□□□□□ -0.22
SEC22A-203ENST00000466950 PCDH18Q9HCL0 1135 aa13.68□□□□□ -0.22
SEC22A-203ENST00000466950 TDP1Q9NUW8 608 aa13.68□□□□□ -0.22
SEC22A-203ENST00000466950 TTC7AQ9ULT0 858 aaPredicted RBP13.68□□□□□ -0.22
SEC22A-203ENST00000466950 SHROOM3Q8TF72 1996 aa13.68□□□□□ -0.22
SEC22A-203ENST00000466950 COL4A3Q01955 1670 aa13.68□□□□□ -0.22
SEC22A-203ENST00000466950 MIA3Q5JRA6 1907 aa13.68□□□□□ -0.22
SEC22A-203ENST00000466950 LEFTY2O00292 366 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 ACSL4O60488 711 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 PRAMEF12O95522 483 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 HMBSP08397 361 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 KDELR1P24390 212 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 CDKN2BP42772 138 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 HCAR3P49019 387 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 KCNQ1P51787 676 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 ZXDBP98169 803 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 DPYSL3Q14195 570 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 KRT81Q14533 505 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 ATP13A4Q4VNC1 1196 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 ODF2Q5BJF6 829 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 TFDP3Q5H9I0 405 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 MS4A13Q5J8X5 152 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 PIK3R6Q5UE93 754 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 POTEHQ6S545 545 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 EP400NLQ6ZTU2 488 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 ARID3BQ8IVW6 561 aaPredicted RBP13.67□□□□□ -0.22
SEC22A-203ENST00000466950 RASGEF1CQ8N431 466 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 CELF5Q8N6W0 485 aaKnown RBP13.67□□□□□ -0.22
SEC22A-203ENST00000466950 KCTD6Q8NC69 237 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 ZSCAN18Q8TBC5 510 aaPredicted RBP13.67□□□□□ -0.22
SEC22A-203ENST00000466950 RAPGEF5Q92565 580 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 SMARCD2Q92925 531 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 E2F7Q96AV8 911 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 ZSWIM3Q96MP5 696 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 KCTD15Q96SI1 283 aaPredicted RBP13.67□□□□□ -0.22
SEC22A-203ENST00000466950 PRMT1Q99873 361 aaKnown RBP13.67□□□□□ -0.22
SEC22A-203ENST00000466950 DDX50Q9BQ39 737 aaKnown RBP13.67□□□□□ -0.22
SEC22A-203ENST00000466950 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 RETREG1Q9H6L5 497 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 SMPD4Q9NXE4 827 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 RNF14Q9UBS8 474 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 CDH22Q9UJ99 828 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 NEU3Q9UQ49 428 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 SH3BP1Q9Y3L3 701 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 USP15Q9Y4E8 981 aaPredicted RBP13.67□□□□□ -0.22
SEC22A-203ENST00000466950 HS3ST4Q9Y661 456 aa13.67□□□□□ -0.22
SEC22A-203ENST00000466950 EYSQ5T1H1 3165 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 C5orf42Q9H799 3197 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 NYNRINQ9P2P1 1898 aaKnown RBP13.66□□□□□ -0.22
SEC22A-203ENST00000466950 IGLV3-10A0A075B6K4 115 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 H3BRJ5 948 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 MOCS2O96007 188 aaPredicted RBP13.66□□□□□ -0.22
SEC22A-203ENST00000466950 KLKB1P03952 638 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 PYGMP11217 842 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 ARL4AP40617 200 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 MLLT6P55198 1093 aaPredicted RBP13.66□□□□□ -0.22
SEC22A-203ENST00000466950 CA9Q16790 459 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 C5orf22Q49AR2 442 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 FAM133BQ5BKY9 247 aaKnown RBP13.66□□□□□ -0.22
SEC22A-203ENST00000466950 ZFYVE27Q5T4F4 411 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 NADSYN1Q6IA69 706 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 SPOCD1Q6ZMY3 1216 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 ZNF683Q8IZ20 524 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 CPXM2Q8N436 756 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 ACTRT1Q8TDG2 376 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 SH3RF2Q8TEC5 729 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 HLA-CQ95604 372 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 OTUB2Q96DC9 234 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 GKN1Q9NS71 199 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 KLHL11Q9NVR0 708 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 GPATCH2LQ9NWQ4 482 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 CFAP97Q9P2B7 532 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 EPS15L1Q9UBC2 864 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 PPARGC1AQ9UBK2 798 aaKnown RBP13.66□□□□□ -0.22
SEC22A-203ENST00000466950 OR12D3Q9UGF7 316 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 AGO1Q9UL18 857 aaKnown RBP13.66□□□□□ -0.22
SEC22A-203ENST00000466950 COL4A2P08572 1712 aa13.66□□□□□ -0.22
SEC22A-203ENST00000466950 TICRRQ7Z2Z1 1910 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 hCG_1818297A0A087WSY0 165 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 EEF2KO00418 725 aaKnown RBP13.65□□□□□ -0.22
SEC22A-203ENST00000466950 GFRA2O00451 464 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 SLC9A3R1O14745 358 aaPredicted RBP13.65□□□□□ -0.22
SEC22A-203ENST00000466950 FGF10O15520 208 aaPredicted RBP13.65□□□□□ -0.22
SEC22A-203ENST00000466950 MBTPS2O43462 519 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 LRIG2O94898 1065 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 IRF1P10914 325 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 TACR2P21452 398 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 KCNA5P22460 613 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 FCARP24071 287 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 DNA2P51530 1060 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 TPI1P60174 286 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 DPYSQ14117 519 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 PUS10Q3MIT2 529 aaKnown RBP13.65□□□□□ -0.22
SEC22A-203ENST00000466950 LEXMQ3ZCV2 418 aa13.65□□□□□ -0.22
SEC22A-203ENST00000466950 PPP6R3Q5H9R7 873 aaPredicted RBP13.65□□□□□ -0.22
SEC22A-203ENST00000466950 FAM78AQ5JUQ0 283 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms