RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 IFNAR2P48551 515 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 ZNF135P52742 658 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-205ENST00000466897 MLLT6P55198 1093 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-205ENST00000466897 NAP1L1P55209 391 aaKnown RBP15.73■□□□□ 0.11
NPHP4-205ENST00000466897 TDGQ13569 410 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 EML3Q32P44 896 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 C5orf22Q49AR2 442 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 MS4A13Q5J8X5 152 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 EFHC2Q5JST6 749 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 TJAP1Q5JTD0 557 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 ERMARDQ5T6L9 678 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 PIK3R6Q5UE93 754 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 NADSYN1Q6IA69 706 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 SCYL2Q6P3W7 929 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 ADGRG2Q8IZP9 1017 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 CCAR2Q8N163 923 aaKnown RBP15.73■□□□□ 0.11
NPHP4-205ENST00000466897 KIAA1524Q8TCG1 905 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 DNASE1L2Q92874 299 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 IRF7Q92985 503 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 TRIM44Q96DX7 344 aaPredicted RBP15.73■□□□□ 0.11
NPHP4-205ENST00000466897 PEBP4Q96S96 227 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 MARK1Q9P0L2 795 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 WNT6Q9Y6F9 365 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 CAPN6Q9Y6Q1 641 aa15.73■□□□□ 0.11
NPHP4-205ENST00000466897 PSTPIP1O43586 416 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 MOCS3O95396 460 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 MOCS2O96007 188 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-205ENST00000466897 IL1R2P27930 398 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 L1CAMP32004 1257 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 GRM2Q14416 872 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 MPP7Q5T2T1 576 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 TTC39BQ5VTQ0 682 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-205ENST00000466897 RNF43Q68DV7 783 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 TRIM58Q8NG06 486 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 FAM71BQ8TC56 605 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 RSAD2Q8WXG1 361 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 CD101Q93033 1021 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 ASIC4Q96FT7 647 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 ALS2CR12Q96Q35 445 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 SNRNP25Q9BV90 132 aaKnown RBP15.72■□□□□ 0.11
NPHP4-205ENST00000466897 COL25A1Q9BXS0 654 aaPredicted RBP15.72■□□□□ 0.11
NPHP4-205ENST00000466897 RETREG1Q9H6L5 497 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 SLC2A4RGQ9NR83 387 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 XPO7Q9UIA9 1087 aaKnown RBP15.72■□□□□ 0.11
NPHP4-205ENST00000466897 AP4E1Q9UPM8 1137 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 HS3ST4Q9Y661 456 aa15.72■□□□□ 0.11
NPHP4-205ENST00000466897 IGLV3-10A0A075B6K4 115 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 TMEM110-MUSTN1A8MSY1 372 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 F5H5T6 163 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 DLL1O00548 723 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 SPOPO43791 374 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 PALMO75781 387 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 SRFP11831 508 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 TCF4P15884 667 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 TACR2P21452 398 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 GDI1P31150 447 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 SLC6A4P31645 630 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 PFKPQ01813 784 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 SEMA3BQ13214 749 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 DPYSL2Q16555 572 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 MANEALQ5VSG8 457 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 DAB2IPQ5VWQ8 1189 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 NT5DC3Q86UY8 548 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 CHSY1Q86X52 802 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 VSIG1Q86XK7 387 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 RHOT1Q8IXI2 618 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 ZNF683Q8IZ20 524 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 CPA6Q8N4T0 437 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 LINC00597Q9H2U6 94 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 BRD9Q9H8M2 597 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 HPS4Q9NQG7 708 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 SPHK2Q9NRA0 654 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 PPARGC1AQ9UBK2 798 aaKnown RBP15.71■□□□□ 0.11
NPHP4-205ENST00000466897 OR12D3Q9UGF7 316 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 PCSK1NQ9UHG2 260 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 DUSP12Q9UNI6 340 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 SORCS3Q9UPU3 1222 aa15.71■□□□□ 0.11
NPHP4-205ENST00000466897 MIF4GDA9UHW6 222 aaKnown RBP15.7■□□□□ 0.1
NPHP4-205ENST00000466897 ZNF487B1APH4 448 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 HOXC11O43248 304 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-205ENST00000466897 ADH1CP00326 375 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 PENKP01210 267 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-205ENST00000466897 CYP17A1P05093 508 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 ASGR2P07307 311 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 RARAP10276 462 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 HOXC13P31276 330 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 CTNNA1P35221 906 aaKnown RBP15.7■□□□□ 0.1
NPHP4-205ENST00000466897 TAS2R40P59535 323 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 RUNX3Q13761 415 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 AUHQ13825 339 aaKnown RBP15.7■□□□□ 0.1
NPHP4-205ENST00000466897 DHCR24Q15392 516 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 MPPE1Q53F39 396 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 ARTNQ5T4W7 220 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 RAP1GAP2Q684P5 730 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 CPNE8Q86YQ8 564 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 HJURPQ8NCD3 748 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-205ENST00000466897 TTC16Q8NEE8 873 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 MSANTD3Q96H12 275 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 ZFYVE19Q96K21 471 aa15.7■□□□□ 0.1
NPHP4-205ENST00000466897 PRICKLE1Q96MT3 831 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms