RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 FAM118BQ9BPY3 351 aa19.28■□□□□ 0.68
CAPN3-209ENST00000466222 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.28■□□□□ 0.68
CAPN3-209ENST00000466222 SPTBN5Q9NRC6 3674 aaKnown RBP19.28■□□□□ 0.68
CAPN3-209ENST00000466222 H3BNC9 293 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 ADH1AP07327 375 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 KRT7P08729 469 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 KDELR1P24390 212 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 RDXP35241 583 aaKnown RBP19.27■□□□□ 0.68
CAPN3-209ENST00000466222 PPP2R2DQ66LE6 453 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 TTC27Q6P3X3 843 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 CCDC105Q8IYK2 499 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 CMASQ8NFW8 434 aaPredicted RBP19.27■□□□□ 0.68
CAPN3-209ENST00000466222 TTLL2Q9BWV7 592 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 EMILIN2Q9BXX0 1053 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 CCSER2Q9H7U1 834 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 KIAA1671Q9BY89 1806 aa19.27■□□□□ 0.68
CAPN3-209ENST00000466222 FSCN2O14926 492 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 CDKN2BP42772 138 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 CLCN4P51793 760 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 CREMQ03060 361 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 PLD1Q13393 1074 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 SIX1Q15475 284 aaPredicted RBP19.27■□□□□ 0.67
CAPN3-209ENST00000466222 ERMARDQ5T6L9 678 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 SPOCD1Q6ZMY3 1216 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 DNAJB7Q7Z6W7 309 aaPredicted RBP19.27■□□□□ 0.67
CAPN3-209ENST00000466222 ADGRD2Q7Z7M1 963 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 KREMEN2Q8NCW0 462 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 GDPD5Q8WTR4 605 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 SLC22A17Q8WUG5 538 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 CALN1Q9BXU9 219 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 ROPN1BQ9BZX4 212 aaPredicted RBP19.27■□□□□ 0.67
CAPN3-209ENST00000466222 ROPN1Q9HAT0 212 aaPredicted RBP19.27■□□□□ 0.67
CAPN3-209ENST00000466222 HSFX1Q9UBD0 423 aa19.27■□□□□ 0.67
CAPN3-209ENST00000466222 UNC80Q8N2C7 3258 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 NRG2O14511 850 aaPredicted RBP19.26■□□□□ 0.67
CAPN3-209ENST00000466222 RGS16O15492 202 aaPredicted RBP19.26■□□□□ 0.67
CAPN3-209ENST00000466222 ECEL1O95672 775 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 C8AP07357 584 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 MMP13P45452 471 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 ARSEP51690 589 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 CDH6P55285 790 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 UBE3AQ05086 875 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 CCDC121Q6ZUS5 278 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 TRMT10CQ7L0Y3 403 aaKnown RBP19.26■□□□□ 0.67
CAPN3-209ENST00000466222 TAX1BP1Q86VP1 789 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 RCOR2Q8IZ40 523 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 CACNA2D3Q8IZS8 1091 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 ZNF512Q96ME7 567 aaPredicted RBP19.26■□□□□ 0.67
CAPN3-209ENST00000466222 XPO6Q96QU8 1125 aaKnown RBP19.26■□□□□ 0.67
CAPN3-209ENST00000466222 OSBPL8Q9BZF1 889 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 ZNF334Q9HCZ1 680 aaPredicted RBP19.26■□□□□ 0.67
CAPN3-209ENST00000466222 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.26■□□□□ 0.67
CAPN3-209ENST00000466222 MTMR10Q9NXD2 777 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 DDX56Q9NY93 547 aaKnown RBP19.26■□□□□ 0.67
CAPN3-209ENST00000466222 WHRNQ9P202 907 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 SNX10Q9Y5X0 201 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 CAPN7Q9Y6W3 813 aa19.26■□□□□ 0.67
CAPN3-209ENST00000466222 RFPL2O75678 378 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 IGLV3-25P01717 112 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 EPCAMP16422 314 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 IL4RP24394 825 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 EFEMP1Q12805 493 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 CALCOCO2Q13137 446 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 EIF4EBP2Q13542 120 aaPredicted RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 BOLA3Q53S33 107 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 PPP6R3Q5H9R7 873 aaPredicted RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 GKAP1Q5VSY0 366 aaPredicted RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 RNF139Q8WU17 664 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 DHX35Q9H5Z1 703 aaKnown RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 TLR8Q9NR97 1041 aaKnown RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 SAE1Q9UBE0 346 aaPredicted RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 FBXW11Q9UKB1 542 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 R3HDM2Q9Y2K5 976 aaKnown RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 FAM72CH0Y354 149 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 GLUD1P00367 558 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 ZDHHC11BP0C7U3 371 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 CSH1P0DML2 217 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 CSH2P0DML3 217 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 DESP17661 470 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 DYNLT1P63172 113 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 ACTN3Q08043 901 aaPredicted RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 SLC29A2Q14542 456 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 TAF12Q16514 161 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 RNF187Q5TA31 235 aaPredicted RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 FAM72AQ5TYM5 149 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 FAM72DQ6L9T8 149 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 TMEM150AQ86TG1 271 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 FAM72BQ86X60 149 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 MIB1Q86YT6 1006 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 ATG4AQ8WYN0 398 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 PGAP3Q96FM1 320 aaPredicted RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 CHMP6Q96FZ7 201 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 RBM41Q96IZ5 413 aaKnown RBP19.25■□□□□ 0.67
CAPN3-209ENST00000466222 SLC28A3Q9HAS3 691 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 PCDH18Q9HCL0 1135 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 MSRAQ9UJ68 235 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 FZD10Q9ULW2 581 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 AP4E1Q9UPM8 1137 aa19.25■□□□□ 0.67
CAPN3-209ENST00000466222 hCG_1818297A0A087WSY0 165 aa19.24■□□□□ 0.67
CAPN3-209ENST00000466222 ZNF840PA6NDX5 716 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms