RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ETNK1Q9HBU6 452 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 CHMP2BQ9UQN3 213 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 FAM169AQ9Y6X4 670 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 AVILO75366 819 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 METTL18O95568 372 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 IGLV3-25P01717 112 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 PHBP35232 272 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 MPP2Q14168 576 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 MRPL58Q14197 206 aaKnown RBP18.85■□□□□ 0.61
COL9A3-205ENST00000466192 EFTUD2Q15029 972 aaKnown RBP eCLIP18.85■□□□□ 0.613e-7■□□□□ 10.5
COL9A3-205ENST00000466192 PAFAH1B3Q15102 231 aaKnown RBP18.85■□□□□ 0.61
COL9A3-205ENST00000466192 ARL13BQ3SXY8 428 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 HEATR6Q6AI08 1181 aaKnown RBP18.85■□□□□ 0.61
COL9A3-205ENST00000466192 BZW1Q7L1Q6 419 aaKnown RBP18.85■□□□□ 0.61
COL9A3-205ENST00000466192 BEND5Q7L4P6 421 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 TAX1BP1Q86VP1 789 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 TDRPQ86YL5 185 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 PLCD3Q8N3E9 789 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 RABGEF1Q9UJ41 708 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 SNX10Q9Y5X0 201 aa18.85■□□□□ 0.61
COL9A3-205ENST00000466192 SF3B1O75533 1304 aaKnown RBP eCLIP18.85■□□□□ 0.618e-6■■■■■ 107
COL9A3-205ENST00000466192 GREB1Q4ZG55 1949 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 C5orf60A6NFR6 353 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 HACD1B0YJ81 288 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 ALDH2P05091 517 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 ERCC2P18074 760 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 DRD4P21917 467 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 GPR15P49685 360 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 MNX1P50219 401 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-205ENST00000466192 EIF4EBP2Q13542 120 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-205ENST00000466192 NFE2Q16621 373 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-205ENST00000466192 CTXN3Q4LDR2 81 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 SDHAF4Q5VUM1 108 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 SCD5Q86SK9 330 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 NPAS4Q8IUM7 802 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 IGDCC3Q8IVU1 814 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 TP53INP2Q8IXH6 220 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 HTR3CQ8WXA8 447 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 PGLYRP2Q96PD5 576 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 PPP1R12CQ9BZL4 782 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 KLC2Q9H0B6 622 aa18.84■□□□□ 0.61
COL9A3-205ENST00000466192 APRTP07741 180 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 PBX3P40426 434 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 ELK3P41970 407 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 MAGEA6P43360 314 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 TPI1P60174 286 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 FAAP100Q0VG06 881 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 DDR2Q16832 855 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 SLC39A5Q6ZMH5 540 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 ANKRD33Q7Z3H0 272 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 FBF1Q8TES7 1133 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 FUBP3Q96I24 572 aaKnown RBP eCLIP18.83■□□□□ 0.61
COL9A3-205ENST00000466192 TRIM62Q9BVG3 475 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 NMUR1Q9HB89 426 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 ABCC13Q9NSE7 274 aa18.83■□□□□ 0.61
COL9A3-205ENST00000466192 NT5C1B-RDH14C9J2C7 533 aa18.83■□□□□ 0.6
COL9A3-205ENST00000466192 CXCL10P02778 98 aa18.83■□□□□ 0.6
COL9A3-205ENST00000466192 KRT15P19012 456 aa18.83■□□□□ 0.6
COL9A3-205ENST00000466192 FGFR3P22607 806 aa18.83■□□□□ 0.6
COL9A3-205ENST00000466192 HCAR3P49019 387 aa18.83■□□□□ 0.6
COL9A3-205ENST00000466192 GEMIN4P57678 1058 aaKnown RBP18.83■□□□□ 0.6
COL9A3-205ENST00000466192 PRKD1Q15139 912 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-205ENST00000466192 PKN2Q16513 984 aaKnown RBP18.83■□□□□ 0.6
COL9A3-205ENST00000466192 BTBD8Q5XKL5 378 aa18.83■□□□□ 0.6
COL9A3-205ENST00000466192 TRABD2AQ86V40 505 aa18.83■□□□□ 0.6
COL9A3-205ENST00000466192 CCDC134Q9H6E4 229 aa18.83■□□□□ 0.6
COL9A3-205ENST00000466192 TBKBP1A7MCY6 615 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 CYP2C18P33260 490 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 C4orf22Q6V702 233 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 TMEM173Q86WV6 379 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-205ENST00000466192 LRRC34Q8IZ02 419 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 AGGF1Q8N302 714 aaeCLIP18.82■□□□□ 0.6
COL9A3-205ENST00000466192 TTC9BQ8N6N2 239 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 GDAP1Q8TB36 358 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 PRDM12Q9H4Q4 367 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 KIF9Q9HAQ2 790 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 OR12D3Q9UGF7 316 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 SLC24A2Q9UI40 661 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 PCDHB5Q9Y5E4 795 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 ACTL7BQ9Y614 415 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 GALTP07902 379 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 VIMP08670 466 aaKnown RBP18.82■□□□□ 0.6
COL9A3-205ENST00000466192 AP1B1Q10567 949 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 PDK1Q15118 436 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 GKAP1Q5VSY0 366 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-205ENST00000466192 ZNF280DQ6N043 979 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 FUT10Q6P4F1 479 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 PPP1R21Q6ZMI0 780 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 DEFB128Q7Z7B8 93 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 VPS52Q8N1B4 723 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 ATAD1Q8NBU5 361 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 RNF34Q969K3 372 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 P2RY11Q96G91 374 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 SEC16BQ96JE7 1060 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 C8orf48Q96LL4 319 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 PSMC3IPQ9P2W1 217 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-205ENST00000466192 SFMBT1Q9UHJ3 866 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 TEX264Q9Y6I9 313 aa18.82■□□□□ 0.6
COL9A3-205ENST00000466192 A0A1W2PQH9 124 aa18.81■□□□□ 0.6
COL9A3-205ENST00000466192 IRAK2O43187 625 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms