RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 BHLHA9Q7RTU4 235 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 ZC3H3Q8IXZ2 948 aaKnown RBP12.31□□□□□ -0.44
CNOT4-208ENST00000465721 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.31□□□□□ -0.44
CNOT4-208ENST00000465721 TAS1R2Q8TE23 839 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 WFIKKN2Q8TEU8 576 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 DDI1Q8WTU0 396 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 CYB5D2Q8WUJ1 264 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 PLD4Q96BZ4 506 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 INTS4Q96HW7 963 aaKnown RBP12.31□□□□□ -0.44
CNOT4-208ENST00000465721 UBL7Q96S82 380 aaPredicted RBP12.31□□□□□ -0.44
CNOT4-208ENST00000465721 FBRSQ9HAH7 460 aa12.31□□□□□ -0.44
CNOT4-208ENST00000465721 EIF4E1BA6NMX2 242 aaKnown RBP12.3□□□□□ -0.44
CNOT4-208ENST00000465721 PLK4O00444 970 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 PDXKO00764 312 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 TIMM44O43615 452 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 PRB1P04280 392 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 IGHV4-34P06331 123 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 TRIM49P0CI25 452 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 TRIM49CP0CI26 452 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 RPS14P62263 151 aaKnown RBP12.3□□□□□ -0.44
CNOT4-208ENST00000465721 ZBTB16Q05516 673 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 PPP3CAQ08209 521 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 PDE4CQ08493 712 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 TRIP4Q15650 581 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-208ENST00000465721 KIAA0907Q7Z7F0 614 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-208ENST00000465721 ADIPOR2Q86V24 386 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 PIP4K2CQ8TBX8 421 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 NXPE2Q96DL1 559 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 ZNF396Q96N95 335 aaPredicted RBP12.3□□□□□ -0.44
CNOT4-208ENST00000465721 ARID3AQ99856 593 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 IMPG2Q9BZV3 1241 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 BTBD1Q9H0C5 482 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 PRSS16Q9NQE7 514 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 FTSJ1Q9UET6 329 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 STRIP2Q9ULQ0 834 aa12.3□□□□□ -0.44
CNOT4-208ENST00000465721 PIEZO2Q9H5I5 2752 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 A0A1B0GTQ1 180 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 MAPK13O15264 365 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 FSBPO95073 299 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 ITPKBP27987 946 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 GCLMP48507 274 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 SGSHP51688 502 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 VAMP7P51809 220 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 BCAT1P54687 386 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 CLDN6P56747 220 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 YWHAGP61981 247 aaKnown RBP eCLIP12.29□□□□□ -0.44
CNOT4-208ENST00000465721 ARID5AQ03989 594 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 INAVAQ3KP66 663 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 MPPE1Q53F39 396 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 RESP18Q5W5W9 173 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 CEP135Q66GS9 1140 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 CHST9Q7L1S5 443 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 RSRC2Q7L4I2 434 aaKnown RBP12.29□□□□□ -0.44
CNOT4-208ENST00000465721 PIGZQ86VD9 579 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 TMPRSS12Q86WS5 348 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 ARHGAP18Q8N392 663 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 ENGASEQ8NFI3 743 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 SGK2Q9HBY8 427 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 ABCB8Q9NUT2 735 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 EXOC1Q9NV70 894 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 GGA2Q9UJY4 613 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 STOML2Q9UJZ1 356 aa12.29□□□□□ -0.44
CNOT4-208ENST00000465721 SPTA1P02549 2419 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 C10orf142B7Z368 130 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 CBX4O00257 560 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 VILLO15195 856 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 ACTN4O43707 911 aaKnown RBP12.28□□□□□ -0.44
CNOT4-208ENST00000465721 TLX3O43711 291 aaPredicted RBP12.28□□□□□ -0.44
CNOT4-208ENST00000465721 DNTTP04053 509 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 DLDP09622 509 aaKnown RBP12.28□□□□□ -0.44
CNOT4-208ENST00000465721 PABPC1P11940 636 aaKnown RBP12.28□□□□□ -0.44
CNOT4-208ENST00000465721 ZNF445P59923 1031 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 SHBQ15464 509 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 TTC31Q49AM3 519 aaPredicted RBP12.28□□□□□ -0.44
CNOT4-208ENST00000465721 KMT5BQ4FZB7 885 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 ZNF394Q53GI3 561 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 ZNF776Q68DI1 518 aaPredicted RBP12.28□□□□□ -0.44
CNOT4-208ENST00000465721 ARHGAP17Q68EM7 881 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 KIAA0895LQ68EN5 471 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 PM20D1Q6GTS8 502 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 GATAD2AQ86YP4 633 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 FMNL3Q8IVF7 1028 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 AHI1Q8N157 1196 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 SLC4A11Q8NBS3 891 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 WFDC5Q8TCV5 224 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 NDRG1Q92597 394 aaKnown RBP12.28□□□□□ -0.44
CNOT4-208ENST00000465721 SLC6A18Q96N87 628 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 ULBP1Q9BZM6 244 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 UBXN6Q9BZV1 441 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 PRORYQ9H606 182 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 PLA2G4CQ9UP65 541 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 TRAF3IP3Q9Y228 551 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 FRMD4BQ9Y2L6 1034 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 HBS1LQ9Y450 684 aaKnown RBP12.28□□□□□ -0.44
CNOT4-208ENST00000465721 PCDHGA1Q9Y5H4 931 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 GTF3C3Q9Y5Q9 886 aa12.28□□□□□ -0.44
CNOT4-208ENST00000465721 HECTD1Q9ULT8 2610 aa12.27□□□□□ -0.44
CNOT4-208ENST00000465721 TULP2O00295 520 aa12.27□□□□□ -0.45
CNOT4-208ENST00000465721 ENC1O14682 589 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms