RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CENPIQ92674 756 aaPredicted RBP21.08■□□□□ 0.97
SKA3-205ENST00000465471 PRICKLE1Q96MT3 831 aaPredicted RBP21.08■□□□□ 0.97
SKA3-205ENST00000465471 XPO6Q96QU8 1125 aaKnown RBP21.08■□□□□ 0.97
SKA3-205ENST00000465471 PRMT1Q99873 361 aaKnown RBP21.08■□□□□ 0.97
SKA3-205ENST00000465471 DDX50Q9BQ39 737 aaKnown RBP21.08■□□□□ 0.97
SKA3-205ENST00000465471 ANLNQ9NQW6 1124 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 PLK2Q9NYY3 685 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 COX16Q9P0S2 106 aa21.08■□□□□ 0.97
SKA3-205ENST00000465471 WDFY4Q6ZS81 3184 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 K7EQS6 105 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 GALR2O43603 387 aaPredicted RBP21.07■□□□□ 0.96
SKA3-205ENST00000465471 KAT7O95251 611 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 CYBBP04839 570 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 CISD3P0C7P0 127 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 MYBL1P10243 752 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 SDC4P31431 198 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 RDXP35241 583 aaKnown RBP21.07■□□□□ 0.96
SKA3-205ENST00000465471 EIF4A3P38919 411 aaKnown RBP21.07■□□□□ 0.96
SKA3-205ENST00000465471 GRIA2P42262 883 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 ATXN1P54253 815 aaKnown RBP21.07■□□□□ 0.96
SKA3-205ENST00000465471 RPL7AP62424 266 aaKnown RBP21.07■□□□□ 0.96
SKA3-205ENST00000465471 DEUP1Q05D60 604 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 MS4A13Q5J8X5 152 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 RFWD3Q6PCD5 774 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 Q6ZS52 159 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 STRADAQ7RTN6 431 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 TERB1Q8NA31 727 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 BHMTQ93088 406 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 MYEOVQ96EZ4 313 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 TRIM11Q96F44 468 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 MCEEQ96PE7 176 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.07■□□□□ 0.96
SKA3-205ENST00000465471 ARHGEF4Q9NR80 690 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 DNAJC17Q9NVM6 304 aaKnown RBP21.07■□□□□ 0.96
SKA3-205ENST00000465471 DEC1Q9P2X7 70 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 SLC27A6Q9Y2P4 619 aa21.07■□□□□ 0.96
SKA3-205ENST00000465471 TRIM24O15164 1050 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 ATMINO43313 823 aaPredicted RBP21.06■□□□□ 0.96
SKA3-205ENST00000465471 TSPAN3O60637 253 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 ADCY5O95622 1261 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 ABCB4P21439 1286 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 TACR2P21452 398 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 GPD1P21695 349 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 KDSRQ06136 332 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 C15orf59Q2T9L4 293 aaPredicted RBP21.06■□□□□ 0.96
SKA3-205ENST00000465471 RAB6CQ53S08 254 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 SFTPA1Q8IWL2 248 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 DDI1Q8WTU0 396 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 ZNF653Q96CK0 615 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 TMA16Q96EY4 203 aaKnown RBP21.06■□□□□ 0.96
SKA3-205ENST00000465471 SLC2A11Q9BYW1 496 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 RAB6CQ9H0N0 254 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 KCNH6Q9H252 994 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 PARVAQ9NVD7 372 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 ZNHIT6Q9NWK9 470 aaKnown RBP21.06■□□□□ 0.96
SKA3-205ENST00000465471 SLC12A6Q9UHW9 1150 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 CLEC4EQ9ULY5 219 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 PAXBP1Q9Y5B6 917 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 MUC6Q6W4X9 2439 aa21.06■□□□□ 0.96
SKA3-205ENST00000465471 CACNA1IQ9P0X4 2223 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 APODP05090 189 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 DGKGP49619 791 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 ZNF143P52747 638 aaPredicted RBP21.05■□□□□ 0.96
SKA3-205ENST00000465471 ATP11AP98196 1134 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 OGDHQ02218 1023 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 MTAPQ13126 283 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 SLC18A3Q16572 532 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 PREPLQ4J6C6 727 aaPredicted RBP21.05■□□□□ 0.96
SKA3-205ENST00000465471 SH3PXD2AQ5TCZ1 1133 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 RAP1GAP2Q684P5 730 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 GRAMD4Q6IC98 578 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 ALKBH5Q6P6C2 394 aaKnown RBP21.05■□□□□ 0.96
SKA3-205ENST00000465471 SND1Q7KZF4 910 aaKnown RBP eCLIP21.05■□□□□ 0.96
SKA3-205ENST00000465471 HJURPQ8NCD3 748 aaPredicted RBP21.05■□□□□ 0.96
SKA3-205ENST00000465471 RNF34Q969K3 372 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 CHP1Q99653 195 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 PRRX2Q99811 253 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 TKTL2Q9H0I9 626 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 WDCPQ9H6R7 721 aa21.05■□□□□ 0.96
SKA3-205ENST00000465471 CNOT8Q9UFF9 292 aaKnown RBP21.05■□□□□ 0.96
SKA3-205ENST00000465471 TMEM191CA6NGB0 347 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 CHURC1-FNTBB4DL54 471 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 CCP110O43303 1012 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 RNF40O75150 1001 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 PAGE1O75459 146 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 CDC25BP30305 580 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 TNFRSF4P43489 277 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 HDAC4P56524 1084 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 GFPT1Q06210 699 aaPredicted RBP21.04■□□□□ 0.96
SKA3-205ENST00000465471 TSR1Q2NL82 804 aaKnown RBP21.04■□□□□ 0.96
SKA3-205ENST00000465471 ARTNQ5T4W7 220 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 PKN3Q6P5Z2 889 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 CHSY1Q86X52 802 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 C1orf210Q8IVY1 113 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 MAML2Q8IZL2 1156 aaPredicted RBP21.04■□□□□ 0.96
SKA3-205ENST00000465471 SPEM1Q8N4L4 309 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 PRSS33Q8NF86 280 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 FAM172AQ8WUF8 416 aa21.04■□□□□ 0.96
SKA3-205ENST00000465471 PRMT8Q9NR22 394 aaPredicted RBP21.04■□□□□ 0.96
SKA3-205ENST00000465471 HS3ST4Q9Y661 456 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms