RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 GDAP2Q9NXN4 497 aa18.87■□□□□ 0.61
SYNE4-204ENST00000465425 RNF103O00237 685 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 PDHXO00330 501 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 XPO1O14980 1071 aaKnown RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 SPTLC1O15269 473 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 SNNO75324 88 aaPredicted RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 TOP3BO95985 862 aaKnown RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 DARSP14868 501 aaKnown RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 PGM1P36871 562 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 CPA2P48052 419 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 CDK18Q07002 472 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 RCN2Q14257 317 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 RCN1Q15293 331 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 CES4AQ5XG92 561 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 PSTKQ8IV42 348 aaKnown RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 ADGRF2Q8IZF7 708 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 ACMSDQ8TDX5 336 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 RNF139Q8WU17 664 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 P2RY11Q96G91 374 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 PRDM16Q9HAZ2 1276 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 PIH1D1Q9NWS0 290 aaKnown RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 TXNDC16Q9P2K2 825 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 GJD2Q9UKL4 321 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 HBS1LQ9Y450 684 aaKnown RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 RALGAPA2Q2PPJ7 1873 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 B2RBV5 119 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 CREB3O43889 395 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 HOXD8P13378 290 aaPredicted RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 PGAM1P18669 254 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 CDC25CP30307 473 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 MUM1Q2TAK8 710 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 SV2CQ496J9 727 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 PIGZQ86VD9 579 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 TMPRSS6Q8IU80 811 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 WDR75Q8IWA0 830 aaKnown RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 CEP41Q9BYV8 373 aa18.86■□□□□ 0.61
SYNE4-204ENST00000465425 EIF2B3Q9NR50 452 aaKnown RBP18.86■□□□□ 0.61
SYNE4-204ENST00000465425 NRCAMQ92823 1304 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 CAPN14A8MX76 684 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 PPP1R12AO14974 1030 aaPredicted RBP18.85■□□□□ 0.61
SYNE4-204ENST00000465425 GLRA3O75311 464 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 ATP5BP06576 529 aaKnown RBP18.85■□□□□ 0.61
SYNE4-204ENST00000465425 CYP2C9P11712 490 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 MGAT1P26572 445 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 PDE1BQ01064 536 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 PDK1Q15118 436 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 FASTKD1Q53R41 847 aaKnown RBP18.85■□□□□ 0.61
SYNE4-204ENST00000465425 ACSBG2Q5FVE4 666 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 PACS1Q6VY07 963 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 NDRG1Q92597 394 aaKnown RBP18.85■□□□□ 0.61
SYNE4-204ENST00000465425 NAT9Q9BTE0 207 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 C20orf27Q9GZN8 174 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 ABHD16BQ9H3Z7 469 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 GOLGA2P5Q9HBQ8 144 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 STAP1Q9ULZ2 295 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 TPP1O14773 563 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 ALDH18A1P54886 795 aaKnown RBP18.85■□□□□ 0.61
SYNE4-204ENST00000465425 NIPAL4Q0D2K0 466 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 DBN1Q16643 649 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 HSF5Q4G112 596 aaPredicted RBP18.85■□□□□ 0.61
SYNE4-204ENST00000465425 MDH1BQ5I0G3 518 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 STXBP5Q5T5C0 1151 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 NETO2Q8NC67 525 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 B3GALNT2Q8NCR0 500 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 CFAP61Q8NHU2 1237 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 PPP1R13LQ8WUF5 828 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 PGBD4Q96DM1 585 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 XPNPEP3Q9NQH7 507 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 SLC17A6Q9P2U8 582 aa18.85■□□□□ 0.61
SYNE4-204ENST00000465425 DAB1O75553 588 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 ALDOAP04075 364 aaKnown RBP18.84■□□□□ 0.61
SYNE4-204ENST00000465425 SMIM10L2AP0DMW4 78 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 SMIM10L2BP0DMW5 78 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 ATP6V1C1P21283 382 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 PSMB4P28070 264 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 TKTP29401 623 aaKnown RBP18.84■□□□□ 0.61
SYNE4-204ENST00000465425 AXLP30530 894 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 GLUD2P49448 558 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 KDSRQ06136 332 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 WASHC5Q12768 1159 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 NME3Q13232 169 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 TBCCQ15814 346 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 N4BP2L1Q5TBK1 243 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-204ENST00000465425 USP50Q70EL3 339 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-204ENST00000465425 MICAL1Q8TDZ2 1067 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 DNAJC9Q8WXX5 260 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 MAML3Q96JK9 1138 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 FAM167BQ9BTA0 163 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 ZFATQ9P243 1243 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 TAGLN3Q9UI15 199 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 SMIM35A0A1B0GVV1 85 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 SPECC1L-ADORA2AF8WAN1 911 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 M0QYT0 321 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 POLBP06746 335 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 NOS2P35228 1153 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 VHLP40337 213 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 IFRD2Q12894 506 aaPredicted RBP18.84■□□□□ 0.61
SYNE4-204ENST00000465425 NAB1Q13506 487 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 C16orf46Q6P387 395 aa18.84■□□□□ 0.61
SYNE4-204ENST00000465425 TREML1Q86YW5 311 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms