RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FAM193AP78312 1265 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 COG7P83436 770 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 GABPB1Q06547 395 aaPredicted RBP17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 ZC3H12AQ5D1E8 599 aaKnown RBP17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 SCYL2Q6P3W7 929 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 FAM131BQ86XD5 332 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 NECTIN4Q96NY8 510 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 NCAPGQ9BPX3 1015 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 SMG9Q9H0W8 520 aaKnown RBP17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 OBSL1O75147 1896 aa17.55■□□□□ 0.4
EXOSC3-203ENST00000465229 SPOPO43791 374 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 IGLV3-27P01718 113 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 HMBSP08397 361 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 IL1R2P27930 398 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 KCNQ1P51787 676 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 TAS2R40P59535 323 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 CUL1Q13616 776 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 SND1Q7KZF4 910 aaKnown RBP eCLIP17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 ARID3BQ8IVW6 561 aaPredicted RBP17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 KLHL7Q8IXQ5 586 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 ADAMTS19Q8TE59 1207 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 KRT35Q92764 455 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 FCRL2Q96LA5 508 aaPredicted RBP17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 MYADMQ96S97 322 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 AP1M1Q9BXS5 423 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 WDCPQ9H6R7 721 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 EPB41L5Q9HCM4 733 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 GDE1Q9NZC3 331 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 PCSK1NQ9UHG2 260 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 CDH7Q9ULB5 785 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 USP18Q9UMW8 372 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 ARHGAP26Q9UNA1 814 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 CPQQ9Y646 472 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 MBTPS2O43462 519 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 WEE1P30291 646 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 CCR1P32246 355 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 RWDD2BP57060 319 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 GUCY2DQ02846 1103 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 SLC25A11Q02978 314 aaKnown RBP17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 RING1Q06587 406 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 SMAD4Q13485 552 aaKnown RBP17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 SEL1L2Q5TEA6 688 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 TXNRD3NBQ6F5E7 133 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 CYP4V2Q6ZWL3 525 aaPredicted RBP17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 MAFAQ8NHW3 353 aaPredicted RBP17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 ZSCAN18Q8TBC5 510 aaPredicted RBP17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 SEC14L1Q92503 715 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 USP13Q92995 863 aaPredicted RBP17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 RNF34Q969K3 372 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 WBP2Q969T9 261 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 PEBP4Q96S96 227 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 MED4Q9NPJ6 270 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 ANLNQ9NQW6 1124 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 TMEM51Q9NW97 253 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 CCL26Q9Y258 94 aa17.54■□□□□ 0.4
EXOSC3-203ENST00000465229 KCNU1A8MYU2 1149 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 I6L893 689 aaPredicted RBP17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 PRPSAP2O60256 369 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 STC2O76061 302 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 PRAMEF12O95522 483 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 SSR1P43307 286 aaKnown RBP17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 TNNT3P45378 269 aaPredicted RBP17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 PPP2R5DQ14738 602 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 FAM78AQ5JUQ0 283 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 CCDC185Q8N715 623 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 TMPRSS4Q9NRS4 437 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 TDP1Q9NUW8 608 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 ARHGEF38Q9NXL2 777 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 HPCAL4Q9UM19 191 aa17.53■□□□□ 0.4
EXOSC3-203ENST00000465229 KLKB1P03952 638 aa17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 IRF1P10914 325 aa17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 SLC2A3P11169 496 aa17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 ADRA1BP35368 520 aa17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 HADHQ16836 314 aaKnown RBP17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 BRMS1LQ5PSV4 323 aa17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 PLD4Q96BZ4 506 aa17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 ASB16Q96NS5 453 aa17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 TKTL2Q9H0I9 626 aa17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 DDX47Q9H0S4 455 aaKnown RBP17.52■□□□□ 0.4
EXOSC3-203ENST00000465229 LEFTY2O00292 366 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 GREM1O60565 184 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 LAMP2P13473 410 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 MARCKSL1P49006 195 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 CARSP49589 748 aaKnown RBP17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 MRPS25P82663 173 aaKnown RBP17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 DHX34Q14147 1143 aaKnown RBP17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 LEXMQ3ZCV2 418 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 ATP13A4Q4VNC1 1196 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 BOLA3Q53S33 107 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 KCNT1Q5JUK3 1230 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 LRRC38Q5VT99 294 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 UNC45BQ8IWX7 931 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 MREGQ8N565 214 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 SH3RF2Q8TEC5 729 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 CASKIN2Q8WXE0 1202 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 SMARCD2Q92925 531 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 NTAN1Q96AB6 310 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 RUNDC3BQ96NL0 473 aa17.51■□□□□ 0.39
EXOSC3-203ENST00000465229 MAGEB5Q9BZ81 275 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms