RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 NOCTQ9UK39 431 aaKnown RBP16.89■□□□□ 0.29
SSNA1-204ENST00000464553 MYO6Q9UM54 1294 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 PLA2G4CQ9UP65 541 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 PAXBP1Q9Y5B6 917 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 FAM186AA6NE01 2351 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 KIAA1549LQ6ZVL6 1849 aa16.89■□□□□ 0.29
SSNA1-204ENST00000464553 TSPAN3O60637 253 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 DAB1O75553 588 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 ERBB2P04626 1255 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 ABCB4P21439 1286 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 TGM1P22735 817 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 P2RY2P41231 377 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 SRSF5Q13243 272 aaKnown RBP16.88■□□□□ 0.29
SSNA1-204ENST00000464553 STARD3Q14849 445 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 TAF5Q15542 800 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 GEN1Q17RS7 908 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 SKOR2Q2VWA4 1001 aaPredicted RBP16.88■□□□□ 0.29
SSNA1-204ENST00000464553 FILIP1LQ4L180 1135 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 MS4A13Q5J8X5 152 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 FAM183BPQ6ZVS7 135 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 NOP9Q86U38 636 aaKnown RBP16.88■□□□□ 0.29
SSNA1-204ENST00000464553 KBTBD6Q86V97 674 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 AHI1Q8N157 1196 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 NT5C3BQ969T7 300 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 PGAP3Q96FM1 320 aaPredicted RBP16.88■□□□□ 0.29
SSNA1-204ENST00000464553 SPACA7Q96KW9 195 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 PCMTD1Q96MG8 357 aaPredicted RBP16.88■□□□□ 0.29
SSNA1-204ENST00000464553 PPP1R9BQ96SB3 815 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 DUSP15Q9H1R2 295 aaPredicted RBP16.88■□□□□ 0.29
SSNA1-204ENST00000464553 CD248Q9HCU0 757 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 BCCIPQ9P287 314 aaKnown RBP eCLIP16.88■□□□□ 0.29
SSNA1-204ENST00000464553 STAP1Q9ULZ2 295 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 STON1Q9Y6Q2 735 aa16.88■□□□□ 0.29
SSNA1-204ENST00000464553 TCRBV21S2A2A0A5A6 115 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 ANTXRLA6NF34 631 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 TBL1XO60907 577 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 EPN2O95208 641 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 CYP1A1P04798 512 aaPredicted RBP16.87■□□□□ 0.29
SSNA1-204ENST00000464553 ATP5BP06576 529 aaKnown RBP16.87■□□□□ 0.29
SSNA1-204ENST00000464553 C7P10643 843 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 HLA-FP30511 346 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 HOXC13P31276 330 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 SLC6A4P31645 630 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 DPP6P42658 865 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 OXCT1P55809 520 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 NOMO3P69849 1222 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 ARID5AQ03989 594 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 SLC12A1Q13621 1099 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 ZC3H12AQ5D1E8 599 aaKnown RBP16.87■□□□□ 0.29
SSNA1-204ENST00000464553 TTC39BQ5VTQ0 682 aaPredicted RBP16.87■□□□□ 0.29
SSNA1-204ENST00000464553 NADSYN1Q6IA69 706 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 SLC36A4Q6YBV0 504 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 DHX40Q8IX18 779 aaKnown RBP16.87■□□□□ 0.29
SSNA1-204ENST00000464553 KIAA2013Q8IYS2 634 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 KDM1BQ8NB78 822 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 ADAM32Q8TC27 787 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 ACOX2Q99424 681 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 FUCA2Q9BTY2 467 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 NLRC4Q9NPP4 1024 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 RTN4Q9NQC3 1192 aaKnown RBP16.87■□□□□ 0.29
SSNA1-204ENST00000464553 DDIT4Q9NX09 232 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.87■□□□□ 0.29
SSNA1-204ENST00000464553 TJP2Q9UDY2 1190 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 GGA2Q9UJY4 613 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 CLEC4EQ9ULY5 219 aa16.87■□□□□ 0.29
SSNA1-204ENST00000464553 OTOGLQ3ZCN5 2332 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 GOLGA6L7A0A1B0GV03 622 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 GFPT2O94808 682 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 ZNF806P0C7X5 589 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 PABPC1P11940 636 aaKnown RBP16.86■□□□□ 0.29
SSNA1-204ENST00000464553 SLC25A52Q3SY17 297 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 BRMS1LQ5PSV4 323 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 RFWD3Q6PCD5 774 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 SND1Q7KZF4 910 aaKnown RBP eCLIP16.86■□□□□ 0.29
SSNA1-204ENST00000464553 ADIPOR2Q86V24 386 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 XYLT1Q86Y38 959 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 PGBD3Q8N328 593 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 HMGB4Q8WW32 186 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 RNF34Q969K3 372 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 TTC17Q96AE7 1141 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 NPY6RQ99463 290 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 FAM204AQ9H8W3 233 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 FBRSQ9HAH7 460 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 SEMA4GQ9NTN9 838 aa16.86■□□□□ 0.29
SSNA1-204ENST00000464553 A0A1W2PQC6 194 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 EPHB6O15197 1021 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 SYNCRIPO60506 623 aaKnown RBP16.85■□□□□ 0.29
SSNA1-204ENST00000464553 ASLP04424 464 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 MMEP08473 750 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 DLDP09622 509 aaKnown RBP16.85■□□□□ 0.29
SSNA1-204ENST00000464553 GABRG2P18507 467 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 POLR2EP19388 210 aaKnown RBP16.85■□□□□ 0.29
SSNA1-204ENST00000464553 MMP8P22894 467 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 CXCR3P49682 368 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 KLK7P49862 253 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 TPM4P67936 248 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 ZNF234Q14588 700 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 IQCB1Q15051 598 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 LPAL2Q16609 132 aa16.85■□□□□ 0.29
SSNA1-204ENST00000464553 MAP7D1Q3KQU3 841 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms