RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LRFN1Q9P244 771 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 KLHL13Q9P2N7 655 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 BTBD3Q9Y2F9 522 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 hCG_1642624A0A1W2PR95 340 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 FAM90A18PA6NE21 464 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 FAM90A16PA6NEW6 464 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 FAM90A9PA6NNJ1 464 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 C16orf96A6NNT2 1141 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 FAM90A5PA8MXJ8 464 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 E5RJQ4 531 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 RRHO14718 337 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 FAM90A15PP0C7V4 464 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 FAM90A14PP0C7W9 464 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 IGFBP2P18065 325 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 STAT6P42226 847 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 AP2B1P63010 937 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 RBM6P78332 1123 aaKnown RBP6.74□□□□□ -1.33
PTCD3-205ENST00000464541 DMWDQ09019 674 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 SF3A3Q12874 501 aaKnown RBP eCLIP6.74□□□□□ -1.331e-8■□□□□ 9.9
PTCD3-205ENST00000464541 SUPT20HL1Q3ZLR7 823 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 C10orf62Q5T681 223 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-205ENST00000464541 ZNF626Q68DY1 528 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 TMEM88Q6PEY1 159 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 RBM44Q6ZP01 1051 aaKnown RBP6.74□□□□□ -1.33
PTCD3-205ENST00000464541 PIGOQ8TEQ8 1089 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 CELF1Q92879 486 aaKnown RBP6.74□□□□□ -1.33
PTCD3-205ENST00000464541 TRMT61AQ96FX7 289 aaKnown RBP6.74□□□□□ -1.33
PTCD3-205ENST00000464541 FCRL5Q96RD9 977 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 SH2D3AQ9BRG2 576 aa6.74□□□□□ -1.33
PTCD3-205ENST00000464541 PABPC3Q9H361 631 aaKnown RBP6.74□□□□□ -1.33
PTCD3-205ENST00000464541 AGO4Q9HCK5 861 aaKnown RBP6.74□□□□□ -1.33
PTCD3-205ENST00000464541 LIN7CQ9NUP9 197 aaKnown RBP6.74□□□□□ -1.33
PTCD3-205ENST00000464541 C19orf53Q9UNZ5 99 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-205ENST00000464541 MBD3L5A6NJ08 208 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-205ENST00000464541 TRIM38O00635 465 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 PLAUP00749 431 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 ALDOAP04075 364 aaKnown RBP6.73□□□□□ -1.33
PTCD3-205ENST00000464541 RPS6KB1P23443 525 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 IDUAP35475 653 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 SLC12A2P55011 1212 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 RPL15P61313 204 aaKnown RBP6.73□□□□□ -1.33
PTCD3-205ENST00000464541 RPS13P62277 151 aaKnown RBP6.73□□□□□ -1.33
PTCD3-205ENST00000464541 TRIM14Q14142 442 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 TRIP6Q15654 476 aaKnown RBP6.73□□□□□ -1.33
PTCD3-205ENST00000464541 FAM83BQ5T0W9 1011 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 ANKRD40Q6AI12 368 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 SLC39A5Q6ZMH5 540 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 RFX6Q8HWS3 928 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 CCDC117Q8IWD4 279 aaPredicted RBP6.73□□□□□ -1.33
PTCD3-205ENST00000464541 STT3BQ8TCJ2 826 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 PIGKQ92643 395 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 MCRS1Q96EZ8 462 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 EMSYQ7Z589 1322 aa6.73□□□□□ -1.33
PTCD3-205ENST00000464541 DNAJC9-AS1A6NH13 148 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 SLC38A8A6NNN8 435 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 KIF28PB7ZC32 967 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 GRK5P34947 590 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 ARHGAP25P42331 645 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 YPEL5P62699 121 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 SLC9C1Q4G0N8 1177 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 ZKSCAN2Q63HK3 967 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 LIN54Q6MZP7 749 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 TFAP2DQ7Z6R9 452 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 CNGA4Q8IV77 575 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 PRSS3P2Q8NHM4 247 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 OTUD7AQ8TE49 926 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-205ENST00000464541 HMGB4Q8WW32 186 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 SIGLEC11Q96RL6 698 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 DDX23Q9BUQ8 820 aaKnown RBP6.72□□□□□ -1.33
PTCD3-205ENST00000464541 TM2D2Q9BX73 214 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 MAGEH1Q9H213 219 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 MLXIPQ9HAP2 919 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 PRDM16Q9HAZ2 1276 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 ZNF70Q9UC06 446 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-205ENST00000464541 B3GNT3Q9Y2A9 372 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 PCSK5Q92824 1860 aa6.72□□□□□ -1.33
PTCD3-205ENST00000464541 CYP3A7-CYP3A51PA0A087WV96 503 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 KCNU1A8MYU2 1149 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 TFEBP19484 476 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 CYP3A7P24462 503 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 SOX2P48431 317 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 FOXL2P58012 376 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 TAS2R50P59544 299 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 BTBD16Q32M84 506 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 TTC22Q5TAA0 569 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 OR1N1Q8NGS0 311 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 TRAPPC12Q8WVT3 735 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 CPT1BQ92523 772 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 KAT2BQ92831 832 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.34
PTCD3-205ENST00000464541 ARPC5LQ9BPX5 153 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 C1QTNF7Q9BXJ2 289 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 SFXN1Q9H9B4 322 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 TMLHEQ9NVH6 421 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 NDUFAF4Q9P032 175 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 DAPP1Q9UN19 280 aa6.71□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3DA0A087WVF3 549 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3IA0A087WXS9 549 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3EA0A087X179 549 aa6.7□□□□□ -1.34
PTCD3-205ENST00000464541 TBC1D3KA0A087X1G2 549 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms