RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 NAT8LQ8N9F0 302 aa15.03■□□□□ -0
COL5A1-205ENST00000464187 STKLD1Q8NE28 680 aa15.03■□□□□ -0
COL5A1-205ENST00000464187 SLC2A13Q96QE2 648 aa15.03■□□□□ -0
COL5A1-205ENST00000464187 SEPT5Q99719 369 aaPredicted RBP15.03■□□□□ -0
COL5A1-205ENST00000464187 ADAM33Q9BZ11 813 aa15.03■□□□□ -0
COL5A1-205ENST00000464187 GPATCH2LQ9NWQ4 482 aa15.03■□□□□ -0
COL5A1-205ENST00000464187 EXOC1LA0A1B0GW35 172 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 CAPN9O14815 690 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 LTFP02788 710 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 FYNP06241 537 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 RBP3P10745 1247 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 NOS2P35228 1153 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 IFNAR2P48551 515 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 HDAC4P56524 1084 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 PDIA2Q13087 525 aaKnown RBP15.02■□□□□ -0
COL5A1-205ENST00000464187 IFT88Q13099 833 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 TMED2Q15363 201 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 HIF1AQ16665 826 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 SLC25A52Q3SY17 297 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 RASIP1Q5U651 963 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 SYPL2Q5VXT5 272 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 LRRC34Q8IZ02 419 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 ZBED8Q8IZ13 594 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 CACNA2D3Q8IZS8 1091 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 NUP93Q8N1F7 819 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 FAM71DQ8N9W8 422 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 KLHL23Q8NBE8 558 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 MGARPQ8TDB4 240 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 IRGQQ8WZA9 623 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 CENPIQ92674 756 aaPredicted RBP15.02■□□□□ -0
COL5A1-205ENST00000464187 RNF157Q96PX1 679 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 PHACTR1Q9C0D0 580 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 PTPRDP23468 1912 aa15.02■□□□□ -0
COL5A1-205ENST00000464187 HAPLN1P10915 354 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 NCAM1P13591 858 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 MPP2Q14168 576 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 KRT81Q14533 505 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 LRRC14Q15048 493 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 ZC3H12AQ5D1E8 599 aaKnown RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 FNBP1LQ5T0N5 605 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 GKAP1Q5VSY0 366 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 SCYL2Q6P3W7 929 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 TADA2BQ86TJ2 420 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 TDRPQ86YL5 185 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 CCDC13Q8IYE1 715 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 TAB3Q8N5C8 712 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 GPR152Q8TDT2 470 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 TEKT4Q8WW24 435 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 AUTS2Q8WXX7 1259 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 MAML1Q92585 1016 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 NT5C3BQ969T7 300 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 TBCBQ99426 244 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 SNRNP25Q9BV90 132 aaKnown RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 MAK16Q9BXY0 300 aaKnown RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 RASSF4Q9H2L5 321 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 PCDH18Q9HCL0 1135 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 MRPL17Q9NRX2 175 aaKnown RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 STK39Q9UEW8 545 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 STAP1Q9ULZ2 295 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 TCRBV7S3A2A0A539 114 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 TMEM63AO94886 807 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 BRAFP15056 766 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 IL4RP24394 825 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 SULT1E1P49888 294 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 ATXN1P54253 815 aaKnown RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 NRLP54845 237 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 PITX1P78337 314 aaPredicted RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 TFDP2Q14188 446 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 PDK2Q15119 407 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 CA9Q16790 459 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 MSS51Q4VC12 460 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 C9orf50Q5SZB4 431 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 BSPRYQ5W0U4 402 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 CAPN12Q6ZSI9 719 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 STRADAQ7RTN6 431 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 ANKMY2Q8IV38 441 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 SRRM1Q8IYB3 904 aaKnown RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 OTUD6BQ8N6M0 293 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 ZNF461Q8TAF7 563 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 NPY6RQ99463 290 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 NCAPGQ9BPX3 1015 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 WDR83Q9BRX9 315 aaKnown RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 VPS37BQ9H9H4 285 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 KCNK9Q9NPC2 374 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 AFF4Q9UHB7 1163 aaKnown RBP15.01□□□□□ -0.01
COL5A1-205ENST00000464187 ACTL7BQ9Y614 415 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 CLUHO75153 1309 aa15.01□□□□□ -0.01
COL5A1-205ENST00000464187 E7ESA3 106 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 ABLIM3O94929 683 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 LIG3P49916 1009 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 ARL4CP56559 192 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 GPX6P59796 221 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 USP46P62068 366 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 BOLA3Q53S33 107 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 DARS2Q6PI48 645 aaKnown RBP15□□□□□ -0.01
COL5A1-205ENST00000464187 C1orf228Q6PIY5 440 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 DENND5BQ6ZUT9 1274 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 ZC3H18Q86VM9 953 aaKnown RBP15□□□□□ -0.01
COL5A1-205ENST00000464187 PQLC3Q8N755 202 aa15□□□□□ -0.01
COL5A1-205ENST00000464187 ANKRD42Q8N9B4 389 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms