RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 RYDENQ9NUL5 291 aaKnown RBP13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 TMEM59LQ9UK28 342 aa13.56□□□□□ -0.24
R3HDM1-213ENST00000463230 ITIH6Q6UXX5 1313 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 ABCB4P21439 1286 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 SEC13P55735 322 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 SLC25A52Q3SY17 297 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 MS4A13Q5J8X5 152 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 IL17RCQ8NAC3 791 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 VCPIP1Q96JH7 1222 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 SYT11Q9BT88 431 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 WDR70Q9NW82 654 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 LRRC53A6NM62 1247 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 ALDH1A2O94788 518 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 KLF8O95600 359 aaPredicted RBP13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 ARID5AQ03989 594 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 C2orf27AQ580R0 203 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 ZC3H12AQ5D1E8 599 aaKnown RBP13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 NADSYN1Q6IA69 706 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 SDE2Q6IQ49 451 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 TSSK4Q6SA08 328 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 MMS22LQ6ZRQ5 1243 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 KIAA0907Q7Z7F0 614 aaPredicted RBP13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 CCDC117Q8IWD4 279 aaPredicted RBP13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 ZNF513Q8N8E2 541 aaPredicted RBP13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 ADAM32Q8TC27 787 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 PCDHB18PQ96TA0 734 aa13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 POLMQ9NP87 494 aaPredicted RBP13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 BZW2Q9Y6E2 419 aaKnown RBP13.55□□□□□ -0.24
R3HDM1-213ENST00000463230 M0QYT0 321 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 GRAP2O75791 330 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 LMNAP02545 664 aaKnown RBP13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 NTSR1P30989 418 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 SLC6A4P31645 630 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 TIE1P35590 1138 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 CXCR3P49682 368 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 OXCT1P55809 520 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 MESP2Q0VG99 397 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 PTP4A2Q12974 167 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 CRY1Q16526 586 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 BNIPLQ7Z465 357 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 C11orf74Q86VG3 221 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 RASSF3Q86WH2 238 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 TSTD1Q8NFU3 115 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 PLK2Q9NYY3 685 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 ADAM22Q9P0K1 906 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 R4GN57 208 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 PRR23AA6NEV1 266 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 F5H5T6 163 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 TACR2P21452 398 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 TNFAIP3P21580 790 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 FNTBP49356 437 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 SULT1E1P49888 294 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 MRE11P49959 708 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 RABGAP1LQ5R372 815 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 ACAD10Q6JQN1 1059 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 MON1BQ7L1V2 547 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 AHI1Q8N157 1196 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 ALLCQ8N6M5 410 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 TXNDC5Q8NBS9 432 aaKnown RBP13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 C3orf20Q8ND61 904 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 FIBINQ8TAL6 211 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 RNF34Q969K3 372 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 P2RY11Q96G91 374 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 GABRG3Q99928 467 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 C2orf42Q9NWW7 574 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 ARHGEF38Q9NXL2 777 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 IFNKQ9P0W0 207 aa13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.54□□□□□ -0.24
R3HDM1-213ENST00000463230 PRRT4C9JH25 899 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 AXIN1O15169 862 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 TSPAN3O60637 253 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 TBL1XO60907 577 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 ENDOD1O94919 500 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 GZMAP12544 262 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 PTPN9P43378 593 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 PITX1P78337 314 aaPredicted RBP13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 ZBED6P86452 979 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 DEUP1Q05D60 604 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 ENPP2Q13822 863 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 TRIM14Q14142 442 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 OTUD1Q5VV17 481 aaPredicted RBP13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 CHSY1Q86X52 802 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 SFTPA1Q8IWL2 248 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 PRICKLE1Q96MT3 831 aaPredicted RBP13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 PHOX2BQ99453 314 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 PRMT1Q99873 361 aaKnown RBP13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 C11orf70Q9BRQ4 267 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 THAP10Q9P2Z0 257 aaPredicted RBP13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 CAPN11Q9UMQ6 739 aa13.53□□□□□ -0.24
R3HDM1-213ENST00000463230 ATG2BQ96BY7 2078 aa13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 GOLGA8SH3BPF8 625 aa13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 MOCS2O96007 188 aaPredicted RBP13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 SLC12A1Q13621 1099 aa13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 C5orf22Q49AR2 442 aa13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 RFWD3Q6PCD5 774 aa13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 SLC30A5Q8TAD4 765 aa13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 GAB3Q8WWW8 586 aa13.52□□□□□ -0.24
R3HDM1-213ENST00000463230 BHMTQ93088 406 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms