RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CREG2Q8IUH2 290 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 FAM217AQ8IXS0 508 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 KIAA1958Q8N8K9 716 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 ATP6V0D2Q8N8Y2 350 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 HSPH1Q92598 858 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 ASB16Q96NS5 453 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 LRRC3BQ96PB8 259 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 PSMB7Q99436 277 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 HERPUD2Q9BSE4 406 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 DCLK3Q9C098 648 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 SMG9Q9H0W8 520 aaKnown RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 POMKQ9H5K3 350 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 DHX35Q9H5Z1 703 aaKnown RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 KLHL11Q9NVR0 708 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 OR12D3Q9UGF7 316 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 AGO1Q9UL18 857 aaKnown RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 CDH7Q9ULB5 785 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 TTC7AQ9ULT0 858 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-202ENST00000463060 NEU3Q9UQ49 428 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 EFR3BQ9Y2G0 817 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 SNX10Q9Y5X0 201 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 HS3ST4Q9Y661 456 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 SAR1BQ9Y6B6 198 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 DOCK8Q8NF50 2099 aa14.86□□□□□ -0.03
COL6A1-202ENST00000463060 E2F8A0AVK6 867 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 GRXCR2A6NFK2 248 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 ZNF185O15231 689 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 ACSL4O60488 711 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 SRGAP2O75044 1071 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 APOEP02649 317 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 KRT1P04264 644 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 CORO1AP31146 461 aaKnown RBP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 HOXC13P31276 330 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 AVPR1AP37288 418 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 DNA2P51530 1060 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 ZNF135P52742 658 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 CDH6P55285 790 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 USP4Q13107 963 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 C5orf22Q49AR2 442 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 FAM133BQ5BKY9 247 aaKnown RBP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 MS4A13Q5J8X5 152 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 EFHC2Q5JST6 749 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 FAM78AQ5JUQ0 283 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 SPOCD1Q6ZMY3 1216 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 C14orf80Q86SX3 495 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 DDX42Q86XP3 938 aaKnown RBP eCLIP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 KCTD6Q8NC69 237 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 ZSCAN18Q8TBC5 510 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 SH3RF2Q8TEC5 729 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 RSPRY1Q96DX4 576 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 RBM41Q96IZ5 413 aaKnown RBP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 MYADMQ96S97 322 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 RRAGDQ9NQL2 400 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 CWC15Q9P013 229 aaKnown RBP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 CFAP97Q9P2B7 532 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 RCOR3Q9P2K3 495 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 SLC12A6Q9UHW9 1150 aa14.85□□□□□ -0.03
COL6A1-202ENST00000463060 USP15Q9Y4E8 981 aaPredicted RBP14.85□□□□□ -0.03
COL6A1-202ENST00000463060 NUP210Q8TEM1 1887 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-202ENST00000463060 IGLV3-10A0A075B6K4 115 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 hCG_1818297A0A087WSY0 165 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 LRRD1A4D1F6 860 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 DRGXA6NNA5 263 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 H3BQ06 376 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-202ENST00000463060 LRIG2O94898 1065 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 FCARP24071 287 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 HARS2P49590 506 aaKnown RBP14.84□□□□□ -0.03
COL6A1-202ENST00000463060 ADCY2Q08462 1091 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 MMRN1Q13201 1228 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 CLUL1Q15846 466 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 ZNF77Q15935 545 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 PPP2R5EQ16537 467 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 TFDP3Q5H9I0 405 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 EP400NLQ6ZTU2 488 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 DENND1CQ8IV53 801 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 MAP7D3Q8IWC1 876 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 ZDHHC14Q8IZN3 488 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 PCDH19Q8TAB3 1148 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 ACTRT1Q8TDG2 376 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 ZNF592Q92610 1267 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 SMARCD2Q92925 531 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 MYEOVQ96EZ4 313 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 NECTIN4Q96NY8 510 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 CSPG4P5Q96PW8 444 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 RNF157Q96PX1 679 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 ZNF670Q9BS34 389 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 SLITRK6Q9H5Y7 841 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 CDC23Q9UJX2 597 aa14.84□□□□□ -0.03
COL6A1-202ENST00000463060 ZFP37Q9Y6Q3 630 aaPredicted RBP14.84□□□□□ -0.03
COL6A1-202ENST00000463060 GOLGA6L7A0A1B0GV03 622 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 MBTPS2O43462 519 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 MOCS2O96007 188 aaPredicted RBP14.83□□□□□ -0.04
COL6A1-202ENST00000463060 IRF1P10914 325 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 LAMP2P13473 410 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 GOT1P17174 413 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 SLC6A4P31645 630 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 HTR7P34969 479 aa14.83□□□□□ -0.04
COL6A1-202ENST00000463060 SLC11A2P49281 568 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms