RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 ZNF571Q7Z3V5 609 aaPredicted RBP9.92□□□□□ -0.82
PKP4-208ENST00000462335 VSTM4Q8IW00 320 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 MFN1Q8IWA4 741 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 CHPFQ8IZ52 775 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 MCOLN2Q8IZK6 566 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 CCDC33Q8N5R6 958 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 C3orf20Q8ND61 904 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 ZNF653Q96CK0 615 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 FCRL2Q96LA5 508 aaPredicted RBP9.92□□□□□ -0.82
PKP4-208ENST00000462335 CFAP57Q96MR6 1250 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 RPRD1AQ96P16 312 aaPredicted RBP9.92□□□□□ -0.82
PKP4-208ENST00000462335 TKTL2Q9H0I9 626 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 RBSNQ9H1K0 784 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 MARK1Q9P0L2 795 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 BCCIPQ9P287 314 aaKnown RBP eCLIP9.92□□□□□ -0.82
PKP4-208ENST00000462335 CNOT8Q9UFF9 292 aaKnown RBP9.92□□□□□ -0.82
PKP4-208ENST00000462335 ADAMTS1Q9UHI8 967 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 RAB23Q9ULC3 237 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 SCINQ9Y6U3 715 aa9.92□□□□□ -0.82
PKP4-208ENST00000462335 ATG2BQ96BY7 2078 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 SYNCRIPO60506 623 aaKnown RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 SRGAP2O75044 1071 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 IPO7O95373 1038 aaKnown RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 KLF8O95600 359 aaPredicted RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 IGLV3-27P01718 113 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 GYPCP04921 128 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 ATP5BP06576 529 aaKnown RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 POLR2EP19388 210 aaKnown RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 TACR2P21452 398 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 NNMTP40261 264 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 PBX1P40424 430 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 SSR1P43307 286 aaKnown RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 ST8SIA6P61647 398 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 ZNF177Q13360 481 aaPredicted RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 CCINQ13939 588 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 STARD3Q14849 445 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 HSF5Q4G112 596 aaPredicted RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 MPP7Q5T2T1 576 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 PIK3R6Q5UE93 754 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 TTC39BQ5VTQ0 682 aaPredicted RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 HEATR6Q6AI08 1181 aaKnown RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 SARM1Q6SZW1 724 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 ARCQ7LC44 396 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 ANKS1BQ7Z6G8 1248 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 CFAP52Q8N1V2 620 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 EMC1Q8N766 993 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 ZNF513Q8N8E2 541 aaPredicted RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 TERB1Q8NA31 727 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 KCNV2Q8TDN2 545 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 FAM122AQ96E09 287 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 PIWIL1Q96J94 861 aaKnown RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 MCEEQ96PE7 176 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 TBCBQ99426 244 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 NPY6RQ99463 290 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 NCAPGQ9BPX3 1015 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 FAM126AQ9BYI3 521 aaPredicted RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 TTYH3Q9C0H2 523 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 FBRSL1Q9HCM7 1045 aaKnown RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 POLMQ9NP87 494 aaPredicted RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 LUC7LQ9NQ29 371 aaKnown RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 KIAA1522Q9P206 1035 aaPredicted RBP9.91□□□□□ -0.82
PKP4-208ENST00000462335 FBXO4Q9UKT5 387 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 TRIOO75962 3097 aa9.91□□□□□ -0.82
PKP4-208ENST00000462335 GREM1O60565 184 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 PAGE1O75459 146 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 RRM1P23921 792 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 PSMA2P25787 234 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 RFC1P35251 1148 aaPredicted RBP9.9□□□□□ -0.82
PKP4-208ENST00000462335 FLT3P36888 993 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 EIF4A3P38919 411 aaKnown RBP9.9□□□□□ -0.82
PKP4-208ENST00000462335 CXCR3P49682 368 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 DGKEP52429 567 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 ADKP55263 362 aaKnown RBP9.9□□□□□ -0.82
PKP4-208ENST00000462335 AUHQ13825 339 aaKnown RBP9.9□□□□□ -0.82
PKP4-208ENST00000462335 FNDC3BQ53EP0 1204 aaKnown RBP9.9□□□□□ -0.82
PKP4-208ENST00000462335 MS4A13Q5J8X5 152 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 EFHC2Q5JST6 749 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 ZFYVE27Q5T4F4 411 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 NAIF1Q69YI7 327 aaPredicted RBP9.9□□□□□ -0.82
PKP4-208ENST00000462335 RWDD4Q6NW29 188 aaKnown RBP9.9□□□□□ -0.82
PKP4-208ENST00000462335 ALKBH5Q6P6C2 394 aaKnown RBP9.9□□□□□ -0.82
PKP4-208ENST00000462335 WDR59Q6PJI9 974 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 Q6ZS52 159 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 CEP68Q76N32 757 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 MON1BQ7L1V2 547 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 C12orf40Q86WS4 652 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 FAM131BQ86XD5 332 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 TSTD1Q8NFU3 115 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 WFIKKN2Q8TEU8 576 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 FAM172AQ8WUF8 416 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 CTNNBL1Q8WYA6 563 aaPredicted RBP9.9□□□□□ -0.82
PKP4-208ENST00000462335 SLC39A13Q96H72 371 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 CNPY3Q9BT09 278 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 PIGVQ9NUD9 493 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 STOML2Q9UJZ1 356 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 TMEM59LQ9UK28 342 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 VANGL2Q9ULK5 521 aa9.9□□□□□ -0.82
PKP4-208ENST00000462335 MUC3AQ02505 3323 aa9.89□□□□□ -0.83
PKP4-208ENST00000462335 C2CD4BA6NLJ0 364 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms