RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 FGF10O15520 208 aaPredicted RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 CEP104O60308 925 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 TCF4P15884 667 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 GJA1P17302 382 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 CEBPBP17676 345 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 CORO1AP31146 461 aaKnown RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 CDKN2BP42772 138 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 KCNQ1P51787 676 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 SEMA3BQ13214 749 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 SMAD4Q13485 552 aaKnown RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 CBX2Q14781 532 aaPredicted RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 SMTNL2Q2TAL5 461 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 ATP13A4Q4VNC1 1196 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 MPP7Q5T2T1 576 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 CCDC181Q5TID7 509 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 TTC39BQ5VTQ0 682 aaPredicted RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 DAB2IPQ5VWQ8 1189 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 TXNRD3NBQ6F5E7 133 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 SPOCD1Q6ZMY3 1216 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 Q6ZNB5 142 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 BZW1Q7L1Q6 419 aaKnown RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 CPNE8Q86YQ8 564 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 CCDC50Q8IVM0 306 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 CPXM2Q8N436 756 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 LZTR1Q8N653 840 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 TTC13Q8NBP0 860 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 ZSCAN18Q8TBC5 510 aaPredicted RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 SH3RF2Q8TEC5 729 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 MYLIPQ8WY64 445 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 TSC1Q92574 1164 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 USP13Q92995 863 aaPredicted RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 HLA-CQ95604 372 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 RPGRIP1Q96KN7 1286 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 ASB16Q96NS5 453 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 SLC22A12Q96S37 553 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 CALN1Q9BXU9 219 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 OSBPL8Q9BZF1 889 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 CATSPERBQ9H7T0 1116 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 GKN1Q9NS71 199 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 THG1LQ9NWX6 298 aaKnown RBP11.04□□□□□ -0.64
RTF1-202ENST00000462276 SMPD4Q9NXE4 827 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 FAM50BQ9Y247 325 aa11.04□□□□□ -0.64
RTF1-202ENST00000462276 IGLV3-10A0A075B6K4 115 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 GOLGA6L10A0A0M3HER8 536 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 C3orf70A6NLC5 250 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 DRGXA6NNA5 263 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 F5H5T6 163 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 EEF2KO00418 725 aaKnown RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 FANCGO15287 622 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 DAPK3O43293 454 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 MOCS2O96007 188 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 KLKB1P03952 638 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 HMBSP08397 361 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 IL4RP24394 825 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 HOXC13P31276 330 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 GJC1P36383 396 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 MARCKSL1P49006 195 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 NR2C2P49116 596 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 DNA2P51530 1060 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 TPI1P60174 286 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 TUBB4BP68371 445 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 DLX2Q07687 328 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 AUHQ13825 339 aaKnown RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 DPYSL3Q14195 570 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 C5orf22Q49AR2 442 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 RAB6CQ53S08 254 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 PPP6R3Q5H9R7 873 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 MS4A13Q5J8X5 152 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 RABGAP1LQ5R372 815 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 STXBP5Q5T5C0 1151 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 MANEALQ5VSG8 457 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 MFSD7Q6UXD7 560 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 RFX8Q6ZV50 586 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 BBS12Q6ZW61 710 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 SLC13A5Q86YT5 568 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 CREG2Q8IUH2 290 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 LRRC49Q8IUZ0 686 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 DENND1CQ8IV53 801 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 FAM217AQ8IXS0 508 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 ZNF557Q8N988 423 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 COG1Q8WTW3 980 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 NXPE3Q969Y0 559 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 ACSF2Q96CM8 615 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 TBC1D31Q96DN5 1066 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 GUCD1Q96NT3 240 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 CSPG4P5Q96PW8 444 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 RNF157Q96PX1 679 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 KCTD15Q96SI1 283 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 PRMT1Q99873 361 aaKnown RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 SIK2Q9H0K1 926 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 RAB6CQ9H0N0 254 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 UBE2ZQ9H832 354 aaPredicted RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 L2HGDHQ9H9P8 463 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 ZFP14Q9HCL3 533 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 CWC15Q9P013 229 aaKnown RBP11.03□□□□□ -0.64
RTF1-202ENST00000462276 CFAP97Q9P2B7 532 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 EPS15L1Q9UBC2 864 aa11.03□□□□□ -0.64
RTF1-202ENST00000462276 AGO1Q9UL18 857 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms