RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 PLK4O00444 970 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 PDXKO00764 312 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 KLRC4O43908 158 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 DNTTP04053 509 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 HLA-FP30511 346 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 AFMP43652 599 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 ZNF445P59923 1031 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 YWHAGP61981 247 aaKnown RBP eCLIP11.34□□□□□ -0.59
CBX3-205ENST00000462165 RPS14P62263 151 aaKnown RBP11.34□□□□□ -0.59
CBX3-205ENST00000462165 STK4Q13043 487 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 TRIP4Q15650 581 aaPredicted RBP11.34□□□□□ -0.59
CBX3-205ENST00000462165 FNDC3BQ53EP0 1204 aaKnown RBP11.34□□□□□ -0.59
CBX3-205ENST00000462165 CCDC157Q569K6 752 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 RAB41Q5JT25 222 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 ADAT2Q7Z6V5 191 aaKnown RBP11.34□□□□□ -0.59
CBX3-205ENST00000462165 KIAA0907Q7Z7F0 614 aaPredicted RBP11.34□□□□□ -0.59
CBX3-205ENST00000462165 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.34□□□□□ -0.59
CBX3-205ENST00000462165 PIP4K2CQ8TBX8 421 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 CYB5D2Q8WUJ1 264 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 NXPE2Q96DL1 559 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 INTS4Q96HW7 963 aaKnown RBP11.34□□□□□ -0.59
CBX3-205ENST00000462165 ORAI3Q9BRQ5 295 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 DNAI2Q9GZS0 605 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 PRSS16Q9NQE7 514 aa11.34□□□□□ -0.59
CBX3-205ENST00000462165 VILLO15195 856 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 MAPK13O15264 365 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 C1QL1O75973 258 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 FSBPO95073 299 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 NR3C1P04150 777 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 PRB1P04280 392 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 IGHV4-34P06331 123 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 CDK4P11802 303 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 CD58P19256 250 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 EIF2S3P41091 472 aaKnown RBP11.33□□□□□ -0.6
CBX3-205ENST00000462165 HARS2P49590 506 aaKnown RBP11.33□□□□□ -0.6
CBX3-205ENST00000462165 BCAT1P54687 386 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 RACK1P63244 317 aaKnown RBP11.33□□□□□ -0.6
CBX3-205ENST00000462165 IL9RQ01113 521 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 TTC31Q49AM3 519 aaPredicted RBP11.33□□□□□ -0.6
CBX3-205ENST00000462165 C6orf118Q5T5N4 469 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 CHST9Q7L1S5 443 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 RSRC2Q7L4I2 434 aaKnown RBP11.33□□□□□ -0.6
CBX3-205ENST00000462165 ADIPOR2Q86V24 386 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 AHI1Q8N157 1196 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 ZNF366Q8N895 744 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 LSM14AQ8ND56 463 aaKnown RBP11.33□□□□□ -0.6
CBX3-205ENST00000462165 GOLGA1Q92805 767 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 ZNF396Q96N95 335 aaPredicted RBP11.33□□□□□ -0.6
CBX3-205ENST00000462165 ARID3AQ99856 593 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 ACE2Q9BYF1 805 aaPredicted RBP11.33□□□□□ -0.6
CBX3-205ENST00000462165 NIF3L1Q9GZT8 377 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 PRORYQ9H606 182 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 GGA2Q9UJY4 613 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 STOML2Q9UJZ1 356 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 SCML1Q9UN30 329 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 FRMD4BQ9Y2L6 1034 aa11.33□□□□□ -0.6
CBX3-205ENST00000462165 NYNRINQ9P2P1 1898 aaKnown RBP11.33□□□□□ -0.6
CBX3-205ENST00000462165 CFAP46Q8IYW2 2715 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 TENM4Q6N022 2769 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 A0A1W2PPC4 97 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 ENC1O14682 589 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 ATXN7O15265 892 aaPredicted RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 TLX3O43711 291 aaPredicted RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 RFPL3O75679 317 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 LATS1O95835 1130 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 DLDP09622 509 aaKnown RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 C1SP09871 688 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 PABPC1P11940 636 aaKnown RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 JUPP14923 745 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 ITPKBP27987 946 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 HNF1BP35680 557 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 VAMP7P51809 220 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 C21orf59P57076 290 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 ZNF394Q53GI3 561 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 CEP135Q66GS9 1140 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 ZNF776Q68DI1 518 aaPredicted RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 KIAA0895LQ68EN5 471 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 PM20D1Q6GTS8 502 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 LRRC69Q6ZNQ3 347 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 USP30Q70CQ3 517 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 BHLHA9Q7RTU4 235 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 PIGZQ86VD9 579 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 FMNL3Q8IVF7 1028 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 ZC3H3Q8IXZ2 948 aaKnown RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 TTC39CQ8N584 583 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 TAS1R2Q8TE23 839 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 TMA16Q96EY4 203 aaKnown RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 FAXDC2Q96IV6 333 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 ELF4Q99607 663 aaPredicted RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 OLA1Q9NTK5 396 aaKnown RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 ABCB8Q9NUT2 735 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 EXOC1Q9NV70 894 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 SUN2Q9UH99 717 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 HBS1LQ9Y450 684 aaKnown RBP11.32□□□□□ -0.6
CBX3-205ENST00000462165 PTPRQQ9UMZ3 2332 aa11.32□□□□□ -0.6
CBX3-205ENST00000462165 LDOC1O95751 146 aaPredicted RBP11.31□□□□□ -0.6
CBX3-205ENST00000462165 ZBED1O96006 694 aa11.31□□□□□ -0.6
CBX3-205ENST00000462165 ATP5BP06576 529 aaKnown RBP11.31□□□□□ -0.6
CBX3-205ENST00000462165 SLFN14P0C7P3 912 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms