RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 HTR3CQ8WXA8 447 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 SLCO2A1Q92959 643 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 PPP2R3CQ969Q6 453 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 CFAP36Q96G28 342 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 ZIM3Q96PE6 472 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 C10orf88Q9H8K7 445 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 PPANQ9NQ55 473 aaKnown RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 ARHGEF4Q9NR80 690 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF446Q9NWS9 450 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 SMPD4Q9NXE4 827 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 CWC15Q9P013 229 aaKnown RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 HCSTQ9UBK5 93 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 MTRRQ9UBK8 725 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 SFMBT1Q9UHJ3 866 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 DNMT3LQ9UJW3 386 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 FBXW11Q9UKB1 542 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 SCML2Q9UQR0 700 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 NME7Q9Y5B8 376 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 BACE2Q9Y5Z0 518 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 ARHGAP42A6NI28 874 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC38A8A6NNN8 435 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 A6NNZ2 444 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 KCNK1O00180 336 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 RNF103O00237 685 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 KIAA0355O15063 1070 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 OPHN1O60890 802 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 PAGE1O75459 146 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 CXCL14O95715 111 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 HAPLN1P10915 354 aaPredicted RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 L1CAMP32004 1257 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 RPL22P35268 128 aaKnown RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 WDR5P61964 334 aaKnown RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 KLF1Q13351 362 aaPredicted RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 XRCC4Q13426 336 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 PPP2R5DQ14738 602 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 KYNUQ16719 465 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 TUBB8Q3ZCM7 444 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 PABPC1LQ4VXU2 614 aaKnown RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 RABGAP1LQ5R372 815 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 SYCP2LQ5T4T6 812 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 LIMS2Q7Z4I7 341 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 VSIG1Q86XK7 387 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 CCDC13Q8IYE1 715 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 PYROXD2Q8N2H3 581 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 MREGQ8N565 214 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 GABPB2Q8TAK5 448 aaPredicted RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC35B2Q8TB61 432 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 USP33Q8TEY7 942 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 CDKL2Q92772 493 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 TOP1MTQ969P6 601 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 CELF6Q96J87 481 aaKnown RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 FCRL2Q96LA5 508 aaPredicted RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 RTP3Q9BQQ7 232 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 SMOC2Q9H3U7 446 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 PRDM12Q9H4Q4 367 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 CSNK1G1Q9HCP0 422 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 XAB2Q9HCS7 855 aaKnown RBP4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 BFARQ9NZS9 450 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 VANGL2Q9ULK5 521 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 FZD10Q9ULW2 581 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 SH3BP1Q9Y3L3 701 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 YIPF1Q9Y548 306 aa4.25□□□□□ -1.73
ATP13A3-206ENST00000461660 PDE4DIPQ5VU43 2346 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 A0A0A0MRY4 1105 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 DGKIO75912 1065 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SASH3O75995 380 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 GLUD1P00367 558 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 JCHAINP01591 159 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 MYL4P12829 197 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ETS1P14921 441 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SYN1P17600 705 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TFE3P19532 575 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 HTR7P34969 479 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 MSH2P43246 934 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 GPR15P49685 360 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ATP1A2P50993 1020 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 CACNA2D1P54289 1103 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PITX1P78337 314 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 GABPB1Q06547 395 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 MTM1Q13496 603 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC29A2Q14542 456 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ZNF235Q14590 738 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 STAT4Q14765 748 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 KCTD19Q17RG1 926 aaPredicted RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 KLHL38Q2WGJ6 581 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ARHGAP15Q53QZ3 475 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 WDR81Q562E7 1941 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PPM1LQ5SGD2 360 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 C1orf53Q5VUE5 145 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 RNF19BQ6ZMZ0 732 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TFAP2DQ7Z6R9 452 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ANKMY2Q8IV38 441 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SLC39A11Q8N1S5 342 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 ZCCHC9Q8N567 271 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 COLGALT1Q8NBJ5 622 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 TSEN2Q8NCE0 465 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 OR2W6PQ8NHA6 318 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 BADQ92934 168 aa4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 PABPC5Q96DU9 382 aaKnown RBP4.24□□□□□ -1.73
ATP13A3-206ENST00000461660 SPATA13Q96N96 652 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms