RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 BTBD19C9JJ37 291 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 F5H0A9 414 aaPredicted RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 H0YIZ8 118 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 H7C1Q1 480 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 AP4M1O00189 453 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 CCNT1O60563 726 aaKnown RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 MBD4O95243 580 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 VNN1O95497 513 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 LMNAP02545 664 aaKnown RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 PYGLP06737 847 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 CYP3A4P08684 503 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 EBLN1P0CF75 366 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 YY1P25490 414 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 CNTFP26441 200 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 SLC8A1P32418 973 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 CYP2C18P33260 490 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 JAK3P52333 1124 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 RCAN1P53805 252 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 TAS2R50P59544 299 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 CFHR3Q02985 330 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 THOC5Q13769 683 aaKnown RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 DCTN1Q14203 1278 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 LIPMQ5VYY2 423 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 ATG16L1Q676U5 607 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 ANKRD40Q6AI12 368 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 PCSK4Q6UW60 755 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 Q6YL49 198 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 LRRC8DQ7L1W4 858 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 SYT13Q7L8C5 426 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 ZNF627Q7L945 461 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 SLC29A4Q7RTT9 530 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 PEG10Q86TG7 708 aaKnown RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 LDLRAD3Q86YD5 345 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 SLC44A3Q8N4M1 653 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 LINC01465Q8N7H1 131 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 C12orf76Q8N812 135 aaPredicted RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 SRFBP1Q8NEF9 429 aaKnown RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 TFAP2BQ92481 460 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 LARP4BQ92615 738 aaKnown RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 HTRA1Q92743 480 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 RILPL2Q969X0 211 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 HIC2Q96JB3 615 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 MAELQ96JY0 434 aaKnown RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 SNX18Q96RF0 628 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 EIF2AK1Q9BQI3 630 aaKnown RBP3.4□□□□□ -1.87
HDAC6-212ENST00000461608 REEP2Q9BRK0 252 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 HTATIP2Q9BUP3 242 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 MLST8Q9BVC4 326 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 ABHD16BQ9H3Z7 469 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 SYBUQ9NX95 663 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 DLL3Q9NYJ7 618 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 DKK3Q9UBP4 350 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 FZD4Q9ULV1 537 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 DNAJC16Q9Y2G8 782 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 DMRT1Q9Y5R6 373 aa3.4□□□□□ -1.87
HDAC6-212ENST00000461608 CYP3A7-CYP3A51PA0A087WV96 503 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 CCDC187A0A096LP49 1063 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 VWA3AA6NCI4 1184 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 A6NLC8 198 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 KRT38O76015 456 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 TMEM63AO94886 807 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 RHOBTB3O94955 611 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 POLBP06746 335 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 ENGP17813 658 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 IGFBP2P18065 325 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 KRT4P19013 534 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 DRD4P21917 467 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 CYP3A7P24462 503 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 LIFRP42702 1097 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 GPD2P43304 727 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 DIO1P49895 249 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 CCT8P50990 548 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 RPL15P61313 204 aaKnown RBP3.39□□□□□ -1.87
HDAC6-212ENST00000461608 LMOD3Q0VAK6 560 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 LMAN2Q12907 356 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 GPR68Q15743 365 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 L1TD1Q5T7N2 865 aaKnown RBP3.39□□□□□ -1.87
HDAC6-212ENST00000461608 WDR78Q5VTH9 848 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 CEP85Q6P2H3 762 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 DENND1BQ6P3S1 775 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 KIRREL2Q6UWL6 708 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 VSTM1Q6UX27 236 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 Q6ZPA2 131 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 DPY19L3Q6ZPD9 716 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 MAATS1Q7Z4T9 603 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 ENDOVQ8N8Q3 282 aaKnown RBP3.39□□□□□ -1.87
HDAC6-212ENST00000461608 HDAC2Q92769 488 aaKnown RBP3.39□□□□□ -1.87
HDAC6-212ENST00000461608 PDLIM2Q96JY6 352 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 HS6ST2Q96MM7 605 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 PPP1R10Q96QC0 940 aaKnown RBP3.39□□□□□ -1.87
HDAC6-212ENST00000461608 FYTTD1Q96QD9 318 aaKnown RBP3.39□□□□□ -1.87
HDAC6-212ENST00000461608 THAP7Q9BT49 309 aaPredicted RBP3.39□□□□□ -1.87
HDAC6-212ENST00000461608 GPR63Q9BZJ6 419 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 TOR3AQ9H497 397 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 MMRN2Q9H8L6 949 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 CHODLQ9H9P2 273 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 PDE11AQ9HCR9 933 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 SLC2A4RGQ9NR83 387 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 VPS45Q9NRW7 570 aa3.39□□□□□ -1.87
HDAC6-212ENST00000461608 GGA3Q9NZ52 723 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms