RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 ACSL4O60488 711 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 TBL1XO60907 577 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 APOEP02649 317 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 EPHX1P07099 455 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 PABPC1P11940 636 aaKnown RBP14.5□□□□□ -0.09
USP4-206ENST00000461553 SLC9A1P19634 815 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 PRKCHP24723 683 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 SGSHP51688 502 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 IRX4P78413 519 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 PDCLQ13371 301 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 MAN2A1Q16706 1144 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 DPCR1Q3MIW9 517 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 FNDC3BQ53EP0 1204 aaKnown RBP14.5□□□□□ -0.09
USP4-206ENST00000461553 FAM133BQ5BKY9 247 aaKnown RBP14.5□□□□□ -0.09
USP4-206ENST00000461553 RFWD3Q6PCD5 774 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 TAC4Q86UU9 113 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 CACUL1Q86Y37 369 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 MFN1Q8IWA4 741 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 SCUBE3Q8IX30 993 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 DEFB119Q8N690 84 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.5□□□□□ -0.09
USP4-206ENST00000461553 CEP76Q8TAP6 659 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 ZNF606Q8WXB4 792 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 SORCS1Q8WY21 1168 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 SLC4A5Q9BY07 1137 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 CD93Q9NPY3 652 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 NAALADL1Q9UQQ1 740 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 TLR6Q9Y2C9 796 aa14.5□□□□□ -0.09
USP4-206ENST00000461553 CACNA1BQ00975 2339 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 EPG5Q9HCE0 2579 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 BECN2A8MW95 431 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 MEI4A8MW99 385 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 TM4SF5O14894 197 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 PAPSS1O43252 624 aaPredicted RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 MOCS2O96007 188 aaPredicted RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 ACADMP11310 421 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 PRKCSHP14314 528 aaPredicted RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 CD6P30203 668 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 SLC6A4P31645 630 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 NOVA1P51513 510 aaKnown RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 ATXN3P54252 364 aaPredicted RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 DUOXA1Q1HG43 343 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 MPP7Q5T2T1 576 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 PIK3R6Q5UE93 754 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 TMEM215Q68D42 235 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 PSAPL1Q6NUJ1 521 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 SLC23A3Q6PIS1 610 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 BEND5Q7L4P6 421 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 CCDC117Q8IWD4 279 aaPredicted RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 ADAM32Q8TC27 787 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 SHC3Q92529 594 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 PRCCQ92733 491 aaPredicted RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 FOXJ1Q92949 421 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 AZIN2Q96A70 460 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 SIPA1Q96FS4 1042 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 FCRL2Q96LA5 508 aaPredicted RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 PRICKLE1Q96MT3 831 aaPredicted RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 NOX5Q96PH1 765 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 MED15Q96RN5 788 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 MKRN2Q9H000 416 aaKnown RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 POPDC2Q9HBU9 364 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 ACP6Q9NPH0 428 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 TMEM74BQ9NUR3 256 aa14.49□□□□□ -0.09
USP4-206ENST00000461553 USP36Q9P275 1121 aaKnown RBP14.49□□□□□ -0.09
USP4-206ENST00000461553 KCNK5O95279 499 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 FYNP06241 537 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 ATP5BP06576 529 aaKnown RBP14.48□□□□□ -0.09
USP4-206ENST00000461553 ENGP17813 658 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 PON1P27169 355 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 MAPK8P45983 427 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 APBA1Q02410 837 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 CDH18Q13634 790 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 UAP1L1Q3KQV9 507 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 SYCP2LQ5T4T6 812 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 MBLAC2Q68D91 279 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 NADSYN1Q6IA69 706 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 METTL3Q86U44 580 aaKnown RBP14.48□□□□□ -0.09
USP4-206ENST00000461553 TMPRSS6Q8IU80 811 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 IRF2BP1Q8IU81 584 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 PASD1Q8IV76 773 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 SLC41A1Q8IVJ1 513 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 RGL4Q8IZJ4 473 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 WFDC5Q8TCV5 224 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 CYB5D2Q8WUJ1 264 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 NUCKS1Q9H1E3 243 aaKnown RBP14.48□□□□□ -0.09
USP4-206ENST00000461553 FAM204AQ9H8W3 233 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 FBRSQ9HAH7 460 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 STIM2Q9P246 746 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 SUSD2Q9UGT4 822 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 CYTH4Q9UIA0 394 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 PLA2G4CQ9UP65 541 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 CEP83Q9Y592 693 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 CEP295Q9C0D2 2601 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 PCNX2A6NKB5 2137 aa14.48□□□□□ -0.09
USP4-206ENST00000461553 GOLGA6L7A0A1B0GV03 622 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 PES1O00541 588 aaKnown RBP14.47□□□□□ -0.09
USP4-206ENST00000461553 CDX4O14627 284 aaPredicted RBP14.47□□□□□ -0.09
USP4-206ENST00000461553 SERPINF2P08697 491 aa14.47□□□□□ -0.09
USP4-206ENST00000461553 DLDP09622 509 aaKnown RBP14.47□□□□□ -0.09
USP4-206ENST00000461553 HLA-EP13747 358 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms