RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 MS4A13Q5J8X5 152 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 LY6G5CQ5SRR4 150 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 RFWD3Q6PCD5 774 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 UBALD2Q8IYN6 164 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 NTAN1Q96AB6 310 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 HEBP1Q9NRV9 189 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 TRIM10Q9UDY6 481 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 HS3ST4Q9Y661 456 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 KIAA1549LQ6ZVL6 1849 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 RNF8O76064 485 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 PROSCO94903 275 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 NFATC1O95644 943 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 PTMAP06454 111 aaKnown RBP11.68□□□□□ -0.54
SSBP1-202ENST00000461433 IL1R2P27930 398 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 MIPP30301 263 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 GJA4P35212 333 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 PCK1P35558 622 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 ARHGAP25P42331 645 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 SOX9P48436 509 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 PFKPQ01813 784 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 SCAPQ12770 1279 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 SLC44A4Q53GD3 710 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 RAP1GAP2Q684P5 730 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 SCYL2Q6P3W7 929 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 TPGS1Q6ZTW0 290 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 C14orf80Q86SX3 495 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 KIAA1328Q86T90 577 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 ZNF683Q8IZ20 524 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 C1orf74Q96LT6 269 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 PRICKLE1Q96MT3 831 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-202ENST00000461433 HAPLN3Q96S86 360 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 MARK1Q9P0L2 795 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 WNT16Q9UBV4 365 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 SLC12A6Q9UHW9 1150 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 PAXBP1Q9Y5B6 917 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 SNX10Q9Y5X0 201 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 DOCK4Q8N1I0 1966 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 KRBA1A5PL33 1030 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 HOXC11O43248 304 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-202ENST00000461433 TSPAN3O60637 253 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 PENKP01210 267 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-202ENST00000461433 TACR2P21452 398 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 GGCXP38435 758 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 SLC25A11Q02978 314 aaKnown RBP11.67□□□□□ -0.54
SSBP1-202ENST00000461433 MTA1Q13330 715 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 AUHQ13825 339 aaKnown RBP11.67□□□□□ -0.54
SSBP1-202ENST00000461433 MESDQ14696 234 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 C5orf22Q49AR2 442 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 FYB2Q5VWT5 728 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 RNF43Q68DV7 783 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 TXNRD3NBQ6F5E7 133 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 FBXL22Q6P050 247 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 SLFN11Q7Z7L1 901 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 CPA6Q8N4T0 437 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 CSGALNACT1Q8TDX6 532 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 EDAQ92838 391 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 COL25A1Q9BXS0 654 aaPredicted RBP11.67□□□□□ -0.54
SSBP1-202ENST00000461433 SIK2Q9H0K1 926 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 PCSK1NQ9UHG2 260 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 FZD10Q9ULW2 581 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 USP18Q9UMW8 372 aa11.67□□□□□ -0.54
SSBP1-202ENST00000461433 FAM72CH0Y354 149 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 DCXO43602 365 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 BUB1O43683 1085 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 BUB1BO60566 1050 aaPredicted RBP11.66□□□□□ -0.54
SSBP1-202ENST00000461433 ADH1CP00326 375 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 ADH5P11766 374 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 MAN1A1P33908 653 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 NOP2P46087 812 aaKnown RBP11.66□□□□□ -0.54
SSBP1-202ENST00000461433 IRAK1P51617 712 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 AIF1P55008 147 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 TAS2R40P59535 323 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 GAD2Q05329 585 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 ARL13BQ3SXY8 428 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 FAM72AQ5TYM5 149 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 NAIF1Q69YI7 327 aaPredicted RBP11.66□□□□□ -0.54
SSBP1-202ENST00000461433 FAM72DQ6L9T8 149 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 TXNDC11Q6PKC3 985 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 ZNF662Q6ZS27 426 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 C12orf40Q86WS4 652 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 FAM72BQ86X60 149 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 ETFBKMTQ8IXQ9 262 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 LGI2Q8N0V4 545 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 PYROXD2Q8N2H3 581 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 TPCN2Q8NHX9 752 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 IGSF8Q969P0 613 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 TMA16Q96EY4 203 aaKnown RBP11.66□□□□□ -0.54
SSBP1-202ENST00000461433 NCAPGQ9BPX3 1015 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 DDX50Q9BQ39 737 aaKnown RBP11.66□□□□□ -0.54
SSBP1-202ENST00000461433 IRX2Q9BZI1 471 aaPredicted RBP11.66□□□□□ -0.54
SSBP1-202ENST00000461433 OSBPL2Q9H1P3 480 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 PLK2Q9NYY3 685 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 LCMT1Q9UIC8 334 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 CLEC4EQ9ULY5 219 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 PIAS3Q9Y6X2 628 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 NCOR1O75376 2440 aa11.66□□□□□ -0.54
SSBP1-202ENST00000461433 IGLV3-10A0A075B6K4 115 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 NEDD8-MDP1E9PL57 170 aa11.65□□□□□ -0.54
SSBP1-202ENST00000461433 SPECC1L-ADORA2AF8WAN1 911 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms