RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 RNF40O75150 1001 aa21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 RTN2O75298 545 aa21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 FTLP02792 175 aaPredicted RBP21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 CYBBP04839 570 aa21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 HOXD9P28356 352 aaPredicted RBP21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 ATXN1P54253 815 aaKnown RBP21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 CCDC14Q49A88 953 aa21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 TERB1Q8NA31 727 aa21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 DDI1Q8WTU0 396 aa21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 TMA16Q96EY4 203 aaKnown RBP21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 PRICKLE1Q96MT3 831 aaPredicted RBP21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 PRMT1Q99873 361 aaKnown RBP21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 ANLNQ9NQW6 1124 aa21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 SPATA6Q9NWH7 488 aaPredicted RBP21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 C2orf42Q9NWW7 574 aa21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 CACNA1HO95180 2353 aa21.38■■□□□ 1.01
RPUSD3-210ENST00000460909 A0A087X0T9 212 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 CHURC1-FNTBB4DL54 471 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 MFAP3LO75121 409 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 ADCY5O95622 1261 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 F9P00740 461 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 APODP05090 189 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 FAM228BP0C875 321 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 PDGFRAP16234 1089 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 PTPN9P43378 593 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 TNFRSF4P43489 277 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 DGKGP49619 791 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 ZNF75DP51815 510 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 DEUP1Q05D60 604 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 ANGPT1Q15389 498 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 RAB6CQ53S08 254 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 MS4A13Q5J8X5 152 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 GRAMD4Q6IC98 578 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 PLEKHA7Q6IQ23 1121 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 DNAJC24Q6P3W2 148 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 SPEM1Q8N4L4 309 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 ATP6V0D2Q8N8Y2 350 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 CENPIQ92674 756 aaPredicted RBP21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 DDX50Q9BQ39 737 aaKnown RBP21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 ANP32EQ9BTT0 268 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 SELENOOQ9BVL4 669 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 SLC2A11Q9BYW1 496 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 RAB6CQ9H0N0 254 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 ABHD10Q9NUJ1 306 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 TMEM51Q9NW97 253 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 ARHGEF38Q9NXL2 777 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 NENFQ9UMX5 172 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 SLC27A6Q9Y2P4 619 aa21.37■■□□□ 1.01
RPUSD3-210ENST00000460909 ABCB4P21439 1286 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 ADKP55263 362 aaKnown RBP21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 RPL7AP62424 266 aaKnown RBP21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 C15orf59Q2T9L4 293 aaPredicted RBP21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 PREPLQ4J6C6 727 aaPredicted RBP21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 BRMS1LQ5PSV4 323 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 MPP7Q5T2T1 576 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 SH3PXD2AQ5TCZ1 1133 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 RAP1GAP2Q684P5 730 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 TMC6Q7Z403 805 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 USP33Q8TEY7 942 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 RNF34Q969K3 372 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 MRFAP1L1Q96HT8 127 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 WDCPQ9H6R7 721 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 PRMT8Q9NR22 394 aaPredicted RBP21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 HCN2Q9UL51 889 aa21.36■■□□□ 1.01
RPUSD3-210ENST00000460909 PAGE1O75459 146 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 TACR2P21452 398 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 SDC4P31431 198 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 KIR2DL1P43626 348 aaPredicted RBP21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 ATP11AP98196 1134 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 MTA1Q13330 715 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 MAMLD1Q13495 774 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 ASTE1Q2TB18 679 aaPredicted RBP21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 EMC10Q5UCC4 262 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 STRADAQ7RTN6 431 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 TKTL2Q9H0I9 626 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 SLC12A6Q9UHW9 1150 aa21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 ARIH1Q9Y4X5 557 aaPredicted RBP21.35■■□□□ 1.01
RPUSD3-210ENST00000460909 MYO18AQ92614 2054 aaKnown RBP21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 TBC1D3BA6NDS4 549 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 PRRT4C9JH25 899 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 ATMINO43313 823 aaPredicted RBP21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 LAMTOR5O43504 91 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 TBL1XO60907 577 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 PAPSS2O95340 614 aaPredicted RBP21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 TPM1P09493 284 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 TDGF1P13385 188 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 GPD1P21695 349 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 RDXP35241 583 aaKnown RBP21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 EIF4A3P38919 411 aaKnown RBP21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 RPS24P62847 133 aaKnown RBP21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 SATB1Q01826 763 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 MAPK8IP2Q13387 824 aaPredicted RBP21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 ARTNQ5T4W7 220 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 SND1Q7KZF4 910 aaKnown RBP eCLIP21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 VPS36Q86VN1 386 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 CHSY1Q86X52 802 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 LGI2Q8N0V4 545 aa21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 HJURPQ8NCD3 748 aaPredicted RBP21.34■■□□□ 1.01
RPUSD3-210ENST00000460909 RPLP0P6Q8NHW5 317 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms