RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 TMEM110-MUSTN1A8MSY1 372 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 DAPK3O43293 454 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 MSI1O43347 362 aaKnown RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 PSTPIP1O43586 416 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 BUB1O43683 1085 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 BUB1BO60566 1050 aaPredicted RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 LRCH4O75427 683 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 MOCS2O96007 188 aaPredicted RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 GLULP15104 373 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 IL9P15248 144 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 MIPP30301 263 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 PGFP49763 221 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 PTPN5P54829 565 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 MLLT6P55198 1093 aaPredicted RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 HDAC4P56524 1084 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 NRG1Q02297 640 aaPredicted RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 GAD2Q05329 585 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 EIF4EBP2Q13542 120 aaPredicted RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 HTR4Q13639 388 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 KRT81Q14533 505 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 PDK2Q15119 407 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 C15orf59Q2T9L4 293 aaPredicted RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 TANGO2Q6ICL3 276 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 CHSY1Q86X52 802 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 VSIG1Q86XK7 387 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 UBALD2Q8IYN6 164 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 DNASE1L2Q92874 299 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 TMA16Q96EY4 203 aaKnown RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 FCRL2Q96LA5 508 aaPredicted RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 MAK16Q9BXY0 300 aaKnown RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 LACRTQ9GZZ8 138 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 KCNF1Q9H3M0 494 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 CATSPERBQ9H7T0 1116 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 KCNK12Q9HB15 430 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 KCND1Q9NSA2 647 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 RCOR3Q9P2K3 495 aaPredicted RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 AGO1Q9UL18 857 aaKnown RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 ALG6Q9Y672 507 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 NUMBLQ9Y6R0 609 aa11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 PRRC2BQ5JSZ5 2229 aaKnown RBP11.41□□□□□ -0.58
SMNDC1-203ENST00000460483 CDH23Q9H251 3354 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 H3BRJ5 948 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 KIF2AO00139 706 aaPredicted RBP11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 FGF10O15520 208 aaPredicted RBP11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 PAGE1O75459 146 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 PRAMEF12O95522 483 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 GDI1P31150 447 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 L1CAMP32004 1257 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 ETFBP38117 255 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 VIPR2P41587 438 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 KCNQ1P51787 676 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 ZP2Q05996 745 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 PARM1Q6UWI2 310 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 DNAAF5Q86Y56 855 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 SUGP1Q8IWZ8 645 aaKnown RBP11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 CCAR2Q8N163 923 aaKnown RBP11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 KCTD6Q8NC69 237 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 HJURPQ8NCD3 748 aaPredicted RBP11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 DDI1Q8WTU0 396 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 SHDQ96IW2 340 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 RBM41Q96IZ5 413 aaKnown RBP11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 ZFRQ96KR1 1074 aaKnown RBP11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 SLC2A11Q9BYW1 496 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 SIK2Q9H0K1 926 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 C8orf33Q9H7E9 229 aaPredicted RBP11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 SPHK2Q9NRA0 654 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 OR12D3Q9UGF7 316 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 PCSK1NQ9UHG2 260 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 CDH22Q9UJ99 828 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 AP4E1Q9UPM8 1137 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 SORCS3Q9UPU3 1222 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 JRKLQ9Y4A0 524 aa11.4□□□□□ -0.58
SMNDC1-203ENST00000460483 ZNF487B1APH4 448 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 CLDN11O75508 207 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 PALMO75781 387 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 ZNF189O75820 626 aaPredicted RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 ZRANB2O95218 330 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 GJB6O95452 261 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 SRFP11831 508 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 ZFXP17010 805 aaPredicted RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 COMTP21964 271 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 SP100P23497 879 aaPredicted RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 HCAR3P49019 387 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 PLXNA3P51805 1871 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 RWDD2BP57060 319 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 COPS2P61201 443 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 OGDHQ02218 1023 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 RUNX3Q13761 415 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 ITPRIPL2Q3MIP1 535 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 VITQ6UXI7 678 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 Q6ZNB5 142 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 BZW1Q7L1Q6 419 aaKnown RBP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 BBS7Q8IWZ6 715 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 RCOR2Q8IZ40 523 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 ADGRG2Q8IZP9 1017 aa11.39□□□□□ -0.59
SMNDC1-203ENST00000460483 GJD3Q8N144 294 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms